Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I22
(562 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 41 8e-04
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.040
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 34 0.069
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 33 0.12
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 33 0.16
SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_37823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 30 1.5
SB_25449| Best HMM Match : Exo_endo_phos (HMM E-Value=7.4e-07) 30 1.5
SB_27388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_50679| Best HMM Match : Tombus_P19 (HMM E-Value=2.1) 29 3.4
SB_22332| Best HMM Match : bZIP_2 (HMM E-Value=0.99) 28 4.5
SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99) 28 4.5
SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52) 28 6.0
SB_25845| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_401| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041) 28 6.0
SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_28291| Best HMM Match : DUF1131 (HMM E-Value=2.3) 27 7.9
SB_33326| Best HMM Match : DUF1279 (HMM E-Value=1.4) 27 7.9
SB_2285| Best HMM Match : IncA (HMM E-Value=3.2) 27 7.9
SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35) 27 7.9
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 142 bits (343), Expect = 2e-34
Identities = 68/105 (64%), Positives = 76/105 (72%)
Frame = +3
Query: 246 NVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQN 425
NVG IQLNRPKALNALC L EL A++ F+AD + IVLTG +AFAAGADIKEMQ
Sbjct: 50 NVGFIQLNRPKALNALCNDLMYELSDALDAFEADKNVGCIVLTGCGRAFAAGADIKEMQP 109
Query: 426 NTYSDNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
TY FL W +S C KP+IAAVNGFALGGGCELAM+CD
Sbjct: 110 LTYQKCLSGDFLGHWTRVSKCTKPVIAAVNGFALGGGCELAMMCD 154
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = +3
Query: 240 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEM 419
K V ++ + RP+ NA+ +L + F+ D ++ VLTG F AG+D++E+
Sbjct: 35 KGKVLVVSIARPEKRNAINSETADQLSETFRHFEIDDSVNVAVLTGKGGNFCAGSDLQEL 94
Query: 420 QNNTYSDNTKQGFLREWED--ISNCGKPIIAAVNGFALGGGCELAMLCD 560
K + D ++ +P+I A+ G+A+GGG ELA+LCD
Sbjct: 95 AQKDAETYMKSFYPPGEGDGPMAEANQPVIGAIQGYAVGGGLELALLCD 143
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Frame = +3
Query: 285 NALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEM--QNNTYSDNTK--- 449
NAL + +L A+++ D + +V+ G K F +G D + + NTK
Sbjct: 272 NALTIEMCEQLVAALHEASKDD-VNVVVIIGAGKYFCSGLDYTCVFTRGPQQKQNTKLLV 330
Query: 450 QGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
+ F E I +C KPIIAAVNG A G G L LCD
Sbjct: 331 ERFKLLVEVIIHCSKPIIAAVNGDAKGFGTSLVALCD 367
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +3
Query: 276 KALNALCKPLFVELGKAVNDFDADPTIAAIVLTGN-EKAFAAGAD-IKEMQNNTYSDNTK 449
K +N+ E+ + D +++ +++T + K F+AG D +KE+ Y + K
Sbjct: 6 KPVNSFSLEFLEEIHDTLEDLESNTDCRGLIVTSSMPKVFSAGLDLVKEL----YKSDEK 61
Query: 450 QGFL--REWEDI--SNCGKPI--IAAVNGFALGGGCELAMLCD 560
+ F+ R ++D+ G + +AAVNG A+ GGC LA CD
Sbjct: 62 RLFVFWRRFQDVWMQLYGSRLATVAAVNGHAVAGGCLLAAACD 104
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 492 KPIIAAVNGFALGGGCELAMLCD 560
KP+I A+ G+A+GGG ELA+LCD
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCD 380
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 258 IQLNRPKALNALCKPLFVELGKAVNDFDADPTI-AAIVLTGNEKAFAAGADI---KEMQN 425
++LNR +PL + L K + + +P + +++++ + AGADI K +N
Sbjct: 49 VKLNRDGIYGIRQQPL-LPLRKVMQEITHNPDVKCSVLMSAKPGCWIAGADINMLKAGEN 107
Query: 426 NTYSDNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCE 542
+G + ++ + + KP++AA+ G +GGG E
Sbjct: 108 AAQVTEIAKGGQQVYQFLEDSPKPVVAAIMGTCMGGGLE 146
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +3
Query: 237 FKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKE 416
+K + I+LNRPK NA+ ++ E A+++ + ++TG + +G D+
Sbjct: 77 YKDGIQTIKLNRPKKYNAITWEMYQEWINALDEGAKSSSCVVTLVTGAGDYYCSGNDLSN 136
Query: 417 MQNNTYSDNTKQG-----FLREW-EDISNCGKPIIAAVNGFALG 530
K LR++ + KP++AA+NG A+G
Sbjct: 137 FAKIPPEGPEKMARAGREVLRKFVSAFIDYPKPLVAAINGPAVG 180
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 35.5 bits (78), Expect = 0.030
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 261 QLNRPKALNALCKPLFVELGKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEMQN-NTYS 437
QL A NAL + V L + V++ + A++L G+ F +G D+ ++ +T
Sbjct: 891 QLAGIAARNALTGHMMVRLAEVVDELEKWQAGKALILHGDAGTFVSGGDLSVLKEIHTPG 950
Query: 438 DNTKQGFL--REWEDISNCGKPIIAAVNGFALGGGCE 542
+ + + + + + +AA+ G A+GGG E
Sbjct: 951 EGEQMCYFMHKTFARLQRLPLISLAAIQGLAIGGGAE 987
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 390 FAAGADIKEMQNNTYSD--NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD 560
F AG D+KE+ S ++ F W + +AA+ G A+ GGC L++ CD
Sbjct: 1478 FCAGLDLKEVLALRKSKLVTFRKTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACD 1536
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 34.3 bits (75), Expect = 0.069
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 477 ISNCGKPIIAAVNGFALGGGCELAMLCD 560
I C KP+IAAV+ +GGG ++ CD
Sbjct: 35 IEKCEKPVIAAVHSACVGGGVDMICACD 62
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 240 KKNVGLIQLNRPKALNALCKPL 305
K N G+I +NRPKALNAL P+
Sbjct: 91 KNNAGIITMNRPKALNALNLPM 112
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 492 KPIIAAVNGFALGGGCELAMLC 557
KP++AA+ G +GGG ELA+ C
Sbjct: 4 KPVVAAIMGTCMGGGLELALSC 25
>SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 444 TKQGFLREWEDISNCGKPIIAAVNGFAL 527
T++ LR ++DIS C + I VNGF++
Sbjct: 30 TRERLLRSYQDISECNRRIHGPVNGFSI 57
>SB_37823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 188 FIVQLLYMKISRLMWSVQKKCRPYTAESPQSTERSLQTTVCGAR*SSQRLRCRS 349
F+ LL + +S + W +++C P E T S CG + +R+R ++
Sbjct: 6 FLAILLVLIVSAVSWRRRRRCAPQNCEVGSWTSWSHCNQACGQHGTQRRMRTKT 59
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 258 IQLNRPKALNALCKPLFVEL-GKAVNDFDADPTIAAIVLTGNEKAFAAGADIKEM 419
I LN PK NAL + + ++D I+ IVL+ N F++G D+KE+
Sbjct: 33 IVLNNPKKRNALSLAMLEAIRSDLLHDLQG---ISVIVLSANGPVFSSGHDLKEL 84
>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 816
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 365 NSGNGWICIEVVDCFTELHKQWFAESVQCFGAIQLYKAYI 246
NS N +C VD E K WF ++++ + L AY+
Sbjct: 27 NSINNSVCNSTVDSSMEQPKDWFIQNIKSYYKSNLIMAYL 66
>SB_25449| Best HMM Match : Exo_endo_phos (HMM E-Value=7.4e-07)
Length = 366
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 365 NSGNGWICIEVVDCFTELHKQWFAESVQCFGAIQLYKAYI 246
NS N +C VD E K WF ++++ + L AY+
Sbjct: 14 NSINNSVCNSTVDSSMEQPKDWFIQNIKSYYKSNLIMAYL 53
>SB_27388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 WSVQKKCRPYTAESPQSTERSLQTTVCGAR*SSQRLRCRSNHCRYCT-DW*REGF 391
W +Q R S ++R G R R++ S HC YCT D EG+
Sbjct: 28 WFLQTYLRSSYCSSASVSQRQTHHCTNGVRHVGFRIKVYSPHCAYCTPDLASEGY 82
>SB_50679| Best HMM Match : Tombus_P19 (HMM E-Value=2.1)
Length = 330
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALGRFSCIR 254
+TIAA+V S KSL+++ +GLQ LG R
Sbjct: 240 TTIAAIVTSLGKSLSSVARGVGNGLQAIGKKLGEHQAYR 278
>SB_22332| Best HMM Match : bZIP_2 (HMM E-Value=0.99)
Length = 272
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALGRF 266
+TIAA+V S KSL+++ +GL+ LG F
Sbjct: 189 TTIAAIVTSLGKSLSSVARGVGNGLKAIGKKLGEF 223
>SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99)
Length = 716
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALGRF 266
+TIAA+V S KSL+++ +GL+ LG F
Sbjct: 633 TTIAAIVTSLGKSLSSVARGVGNGLKAIGKKLGEF 667
>SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52)
Length = 281
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = -1
Query: 445 VLSLYVLFCISLISAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSALG 272
+ +++ +C ++I+ A A +TIAA+V S KSL+++ +GL+ LG
Sbjct: 178 IKAIFKKYCFTVIAIGLAVA-----TTIAAIVTSLGKSLSSVARGVGNGLKAIGKKLG 230
>SB_25845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 495 ASHSWRCPPTRVRILVLYCHCMYYSAF 415
AS +WR ++ + V++ C+ YSAF
Sbjct: 159 ASQAWRLKDLQIFVKVIFAFCIPYSAF 185
>SB_401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = -3
Query: 356 NGWICIEVVDCFTELHKQWFAESVQCFGAIQLYKAYIFFEPTTSILIFSYTGAAL*NLTK 177
+G +C+++++ +EL K S QC +Q+ ++ T S + + L+K
Sbjct: 60 SGTLCLQIMESGSELSKT--VSSTQC---LQIMESGSELSKTVSGTLCLQIMESGSELSK 114
Query: 176 TVLETAAILVLQNNFFPSKTLVTALTEAIV 87
TV T + ++++ SKT+ T + + I+
Sbjct: 115 TVSGTLCLQIMESGSELSKTVATFILQKIL 144
>SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041)
Length = 428
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 445 VLSLYVLFCISLISAPAAKAFSLPVSTIAAMVGSASKSLTALPSSTNSGLQRAFSAL--- 275
V SL V + P+ + V ++ AMV SA +S+ PS+ +S L +A S +
Sbjct: 184 VRSLMVNLSTDPLQDPSPMTTTEMVRSLTAMVHSAGQSIKDSPSA-SSPLVKAISQIETS 242
Query: 274 -GRFSCIRPTFFLN 236
S IRPT LN
Sbjct: 243 ATATSLIRPTITLN 256
>SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 421 RIIHTVTIQNKDSYASGRTSPTVGSP 498
+I H + +Q DS+A+ +PTV SP
Sbjct: 266 QIPHPIPMQKSDSFATDVIAPTVSSP 291
>SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = -1
Query: 490 PQLEMSSHSRKNPCFVLSLYVLFCISLISAPAAKAFSLPVSTIAAMVGSASKSLTALPSS 311
P+ H RK P + + I+ P+ ++SLP T +V S + +L
Sbjct: 228 PEKHSIPHERKAPSYSFGSRTKYAQKQIT-PSPNSYSLPALTGPKVVNKTSAAAYSLTGR 286
Query: 310 TNSG 299
+N+G
Sbjct: 287 SNNG 290
>SB_28291| Best HMM Match : DUF1131 (HMM E-Value=2.3)
Length = 421
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALG 272
+TIAA+V S KSL+++ +GLQ LG
Sbjct: 338 TTIAAIVTSLGKSLSSVARGVGNGLQAIGKKLG 370
>SB_33326| Best HMM Match : DUF1279 (HMM E-Value=1.4)
Length = 326
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 373 VSTIAAMVGSASKSLTALPSSTNSGLQRAFSALG 272
V+TIAA+V S KSL+++ +GL+ LG
Sbjct: 242 VTTIAAIVTSLGKSLSSVARGVGNGLKAIGKKLG 275
>SB_2285| Best HMM Match : IncA (HMM E-Value=3.2)
Length = 293
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALG 272
+TIAA+V S SKSL+++ +GL+ LG
Sbjct: 239 TTIAAIVTSLSKSLSSVARGVGNGLKAIGKKLG 271
>SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35)
Length = 322
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 370 STIAAMVGSASKSLTALPSSTNSGLQRAFSALG 272
+TIAA+V S KSLT++ +GL+ LG
Sbjct: 239 TTIAAIVTSLGKSLTSVARGVGNGLKAIGKKLG 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,771,210
Number of Sequences: 59808
Number of extensions: 351970
Number of successful extensions: 1080
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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