Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I22
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.8  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.4  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 444 YCHCMYYSAFP*YQHPL 394
           Y  C+ ++AFP Y H +
Sbjct: 186 YSQCVTFNAFPTYTHEI 202



 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 479 LQLWEAHHRCRQRICFGW 532
           LQLW+   R +  + F W
Sbjct: 144 LQLWDVDKRGKIMLSFAW 161


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 275 QSTERSLQTTVCGAR*SSQRLRCRSNHCRYC 367
           +S ++ +Q   C        LR   N C+YC
Sbjct: 44  RSIQQKIQYRPCTKNQQCSILRINRNRCQYC 74


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 275 QSTERSLQTTVCGAR*SSQRLRCRSNHCRYC 367
           +S ++ +Q   C        LR   N C+YC
Sbjct: 93  RSIQQKIQYRPCTKNQQCSILRINRNRCQYC 123


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 GADIKEMQNNTYSDNTKQ 452
           GA++KE+  NT+  N  Q
Sbjct: 402 GANVKELIRNTHCVNNNQ 419


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,905
Number of Sequences: 438
Number of extensions: 3505
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)