Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I19
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    22   2.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   4.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   5.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   7.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   7.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   7.6  

>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 47  INLKLLIHPLGCTILKNSY 103
           ++L    HP G TI++N Y
Sbjct: 47  LDLNAQNHPRGLTIIQNGY 65


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 177 NSMAKGKITVNGLYLLLVRN 118
           NS  K ++T+NG+Y  ++RN
Sbjct: 98  NSPEK-RLTLNGIYEYIMRN 116


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 13  FFILIVFELYPYKFETLNSPSRVYNF 90
           F++   F L PY    + +  +V+ F
Sbjct: 24  FYVCTFFGLAPYSLVRVENGKKVFKF 49


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 13  FFILIVFELYPYKFETLNSPSRVYNF 90
           F++   F L PY    + +  +V+ F
Sbjct: 24  FYVCTFFGLAPYSLVRVENGKKVFKF 49


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 249 SNCKFNQIMANNKYQTW*HNIQNDN 175
           SN +++    NN    W  N  NDN
Sbjct: 372 SNNRWHNNNGNNSNNHWRKNNPNDN 396


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 25  IVFELYPYKFETLNSPSRVYNFEKLLYTCSF 117
           I F  + Y F+  N  +      ++LY CS+
Sbjct: 153 ITFGWHTYIFDVPNFVNEYVQAIEVLYICSY 183


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = -1

Query: 341 KVTRSYGVSFAVITHVSDRSILILTRLSNLIQIVNSIKSWRIINIKHGNTIFRTT 177
           + T S+  ++    +    S L+L  LS   ++   +   R   + HG T+ +TT
Sbjct: 132 RYTLSFIENYCQFLYNCFHSTLLLMILSRYQRLKAQLWQNRYETVAHGMTVQKTT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,382
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)