Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I19
         (392 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   6.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   6.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 104 YKSFSKLYTREGELRVSNLYG*SSKTINIK 15
           Y +  KLYT++G   + N+   +  ++N++
Sbjct: 346 YGNHVKLYTKQGLNVLGNIVQGNGDSVNVQ 375


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = -3

Query: 381 YLTSDVNPAHRPYQSDQELRXXXXXXXXXXXSVYFNFNT 265
           Y T   +PA  P+Q D  +             V  N+ T
Sbjct: 408 YQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKT 446



 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 22 LIVFELYPYKFETLN 66
          LIV+++YP  F+  N
Sbjct: 30 LIVYQVYPRSFKDSN 44


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 104 YKSFSKLYTREGELRVSNLYG*SSKTINIK 15
           Y +  KLYT++G   + N+   +  ++N++
Sbjct: 346 YGNHVKLYTKQGLNVLGNIVQGNGDSVNVQ 375


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 252 HSNCKFNQIMANNKYQTW*HNIQND 178
           H+N  +N    NN Y  + +N  N+
Sbjct: 324 HNNNNYNNNNYNNNYNNYNNNNYNN 348


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = -3

Query: 381 YLTSDVNPAHRPYQSDQELRXXXXXXXXXXXSVYFNFNT 265
           Y T   +PA  P+Q D  +             V  N+ T
Sbjct: 408 YQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKT 446



 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 22 LIVFELYPYKFETLN 66
          LIV+++YP  F+  N
Sbjct: 30 LIVYQVYPRSFKDSN 44


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 366 VNPAHRPYQSDQE 328
           V   HRPYQ  Q+
Sbjct: 156 VQDHHRPYQQQQQ 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,073
Number of Sequences: 438
Number of extensions: 2022
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)