Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I18
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 32 0.14
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 0.42
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 29 0.96
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 29 0.96
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 29 1.3
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 29 1.3
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 2.2
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 2.2
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 28 2.9
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z74039-1|CAA98503.1| 451|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 27 3.9
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 27 3.9
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 27 3.9
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 27 5.1
U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 26 9.0
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 26 9.0
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 26 9.0
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 23 9.5
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 23 9.5
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.019
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 282 QDSNHSGTGNVDNFIITGGLDDVIKVWQLDNGKLEL 389
+D N D I TGG+D ++K+WQ+D K++L
Sbjct: 478 KDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQL 513
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 309 NVDNFIITGGLDDVIKVWQLDNGKLELRH 395
N D I++ G D V+KVW L N +L+ H
Sbjct: 166 NRDPVIVSAGWDKVVKVWNLGNCRLKTNH 194
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 318 NFIITGGLDDVIKVWQLDNGKL 383
NFI TG D +K+WQ+D G L
Sbjct: 1349 NFIATGSRDMSLKIWQIDKGFL 1370
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGK 380
+ F+ITG D V+++W + NGK
Sbjct: 1007 NQFLITGSGDFVVQMWDVTNGK 1028
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.96
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 318 NFIITGGLDDVIKVWQLDNGKL--ELRHQLE 404
N++++G D I+VW NGKL +L++Q +
Sbjct: 227 NYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQ 257
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.96
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 318 NFIITGGLDDVIKVWQLDNGKL--ELRHQLE 404
N++++G D I+VW NGKL +L++Q +
Sbjct: 227 NYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQ 257
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKLEL 389
+ + +GG D +IK+W L +G+L+L
Sbjct: 196 NQWFASGGADRIIKIWDLASGQLKL 220
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKLEL 389
+ + +GG D +IK+W L +G+L+L
Sbjct: 196 NQWFASGGADRIIKIWDLASGQLKL 220
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 29.1 bits (62), Expect = 1.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 321 FIITGGLDDVIKVWQLDNGK 380
+I TGG D+ +K+W ++N K
Sbjct: 339 YIFTGGNDNQVKIWDVENNK 358
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 28.3 bits (60), Expect = 2.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKL 383
D+ ++TG D+ +KVW +D G++
Sbjct: 264 DDVLVTGSDDNTLKVWCIDKGEV 286
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 28.3 bits (60), Expect = 2.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKL 383
D+ ++TG D+ +KVW +D G++
Sbjct: 266 DDVLVTGSDDNTLKVWCIDKGEV 288
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 28.3 bits (60), Expect = 2.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKL 383
D+ ++TG D+ +KVW +D G++
Sbjct: 266 DDVLVTGSDDNTLKVWCIDKGEV 288
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.9 bits (59), Expect = 2.9
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +3
Query: 321 FIITGGLDDVIKVWQLDNGK 380
+I+T G+D ++K+W+L +
Sbjct: 317 YILTSGMDSIVKLWELSTNR 336
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 27.9 bits (59), Expect = 2.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 324 IITGGLDDVIKVWQLDNGK 380
+++ G DD +K+W LDN K
Sbjct: 340 LLSRGFDDTLKMWSLDNPK 358
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 27.5 bits (58), Expect = 3.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 324 IITGGLDDVIKVWQLDNGK 380
I+TGG+ +++K W L+ G+
Sbjct: 133 IVTGGMKNLLKTWNLETGQ 151
>Z74039-1|CAA98503.1| 451|Caenorhabditis elegans Hypothetical
protein K03B8.1 protein.
Length = 451
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 276 FRYFHFHLLCYSLFLYGSNRNTK*NRHV 193
++YF+FHL + +YGS+ N H+
Sbjct: 26 YQYFYFHLTLSIVLIYGSDIGKDANEHM 53
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 3.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKL 383
DN I+TG D +W +++G+L
Sbjct: 168 DNLILTGSGDSTCAIWDVESGQL 190
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 27.5 bits (58), Expect = 3.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 174 QLKKENAHDDSIWCCGWS 227
QL++ + H+DS++ C WS
Sbjct: 313 QLERIDEHEDSVYACAWS 330
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 3.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 315 DNFIITGGLDDVIKVWQLDNGKL 383
DN I+TG D +W +++G+L
Sbjct: 168 DNLILTGSGDSTCAIWDVESGQL 190
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.1 bits (57), Expect = 5.1
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +3
Query: 324 IITGGLDDVIKVWQL 368
+I+GG+D+V+KVW +
Sbjct: 180 VISGGIDNVLKVWDM 194
>U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical
protein F58F9.6 protein.
Length = 291
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 38 NLCISRYNLEYYNNI 82
N C +R NLEY+NN+
Sbjct: 196 NSCTARQNLEYFNNV 210
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 282 QDSNHSGTGNVDNFIITGGLDDVIKVWQLDNGKLEL 389
QDS S + N D I++ D +K+W L N + L
Sbjct: 365 QDSVTSVSFNTDYRIVSSSDDATVKIWDLRNMRTPL 400
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 282 QDSNHSGTGNVDNFIITGGLDDVIKVWQLDNGKLEL 389
QDS S + N D I++ D +K+W L N + L
Sbjct: 363 QDSVTSVSFNTDYRIVSSSDDATVKIWDLRNMRTPL 398
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 318 NFIITGGLDDVIKVWQLDN 374
N +I+ LD IK+W ++N
Sbjct: 1349 NILISSSLDHTIKIWNMEN 1367
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 183 KENAHDDSIWCCGWS 227
K AHD I CC W+
Sbjct: 181 KWKAHDGIILCCDWN 195
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 318 NFIITGGLDDVIKVW 362
+ I+TGG D KVW
Sbjct: 199 DLIVTGGEDLKFKVW 213
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 183 KENAHDDSIWCCGWS 227
K AHD I CC W+
Sbjct: 181 KWKAHDGIILCCDWN 195
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 318 NFIITGGLDDVIKVW 362
+ I+TGG D KVW
Sbjct: 199 DLIVTGGEDLKFKVW 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,910,262
Number of Sequences: 27780
Number of extensions: 126126
Number of successful extensions: 392
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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