Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I17
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.47 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.47 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.4  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   5.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.7  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 180 GRILFTNKKSNKQLEKILIYWISMFCESIPNIDHF 76
           G +  T  K +KQ+E  LI+W      S   + HF
Sbjct: 147 GGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHF 181



 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 259 VPLVLSIKKNGNSFC 215
           +P+VLSI KN  S+C
Sbjct: 273 LPIVLSIVKNCLSYC 287


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 180 GRILFTNKKSNKQLEKILIYWISMFCESIPNIDHF 76
           G +  T  K +KQ+E  LI+W      S   + HF
Sbjct: 147 GGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHF 181



 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 259 VPLVLSIKKNGNSFC 215
           +P+VLSI KN  S+C
Sbjct: 273 LPIVLSIVKNCLSYC 287


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/24 (29%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 156 KSNKQLEKILIY-WISMFCESIPN 88
           ++   ++K+++  WIS+FC  + N
Sbjct: 297 RTGANIKKLIVNTWISLFCVKVTN 320


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -3

Query: 439 GIEPETSERQSHRNTTAPPRHHL*YDVYMYIICK 338
           G+ P  S +  H +  A P     YD  +   CK
Sbjct: 44  GMSPYASSQHHHHHLQARPPQDSPYDASVAAACK 77


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 390 AVVLRCDCRSEVSGSIPGS 446
           A+  R +C    +GSIPG+
Sbjct: 75  ALRFRYECEGRSAGSIPGA 93


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 327 IFAYLQMIYIYTSYY 371
           +F +   IY++T YY
Sbjct: 144 VFVFCYFIYLFTVYY 158


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 421 RSRVRYPGRV 450
           RSR+RY GR+
Sbjct: 45  RSRIRYQGRI 54


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 64  YKILKMIYIWNRFT 105
           + +L M+ IW RFT
Sbjct: 171 FMMLLMLEIWRRFT 184


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 64  YKILKMIYIWNRFT 105
           + +L M+ IW RFT
Sbjct: 167 FMMLLMLEIWRRFT 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,207
Number of Sequences: 336
Number of extensions: 2351
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)