Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I16
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    26   0.61 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   3.2  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   7.5  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   7.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   9.9  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 312 QTDP*REESSLPSFILPDIFRVPGPHRRMEGSCG 413
           + +P   +   P+ +L D+F+VP    +  G CG
Sbjct: 360 EDEPSDNDDQTPTDVLTDVFQVPPDVEKYVGFCG 393


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 462 HSHE-NPDRERCNQQTPAHNSLP 397
           H H+  P + R ++Q+PAH   P
Sbjct: 220 HQHQLQPQQRRFHRQSPAHRRKP 242


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -3

Query: 453 ENPDRERCNQQTPAHNSLPFSGGGLELGICLAE*SSVES 337
           +N   E+C  + P    +P  G     G C+ + + +E+
Sbjct: 45  DNAIMEKCRAENPKPGQMPAPGVPRTEGCCIVQCAMMET 83


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 381 GPHRRMEGSCGLGSVDC 431
           GPHR    SC + S+ C
Sbjct: 282 GPHRIAAASCAVTSMTC 298


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 244 AIRFRADTPDIKAIREKEKSDWRKLTLEEKKALY 345
           A++FR    D+ A + K  S+ R+    E+K  Y
Sbjct: 34  AVQFRDLNADVNAFQRKFVSEVRRCDEMERKLRY 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,207
Number of Sequences: 2352
Number of extensions: 12289
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)