Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I16
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase sub... 79 8e-15
U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subu... 79 8e-15
M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein. 79 8e-15
M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subu... 79 8e-15
BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase su... 79 8e-15
AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase su... 79 8e-15
BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase su... 62 1e-09
AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase su... 62 1e-09
AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase su... 62 1e-09
BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein. 40 0.004
BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein. 33 0.54
BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein. 33 0.54
AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 33 0.54
AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 33 0.54
AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide relea... 33 0.54
U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated prot... 31 2.9
L24521-1|AAA36776.1| 368|Homo sapiens transformation-related pr... 30 5.0
AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology dom... 30 5.0
AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology dom... 30 5.0
AL035071-2|CAM27373.1| 845|Homo sapiens DNA (cytosine-5-)-methy... 30 5.0
AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens ... 30 5.0
AF176228-1|AAF04015.1| 845|Homo sapiens DNA cytosine-5 methyltr... 30 5.0
AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein. 30 5.0
>X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase
subunit IV protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subunit
IV protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subunit
IV precursor protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase
subunit IV protein.
Length = 144
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 11 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 105
>AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 79.0 bits (186), Expect = 8e-15
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQA 384
P Y+DR D P+P + + + KA++EKEK+ W L+++EK LYR F ++++E
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 385 PTGEWKGVVGWGLLIASLSVWIFMGMKLFVYSPLP 489
+ EWK VVG + + + M K +VY PLP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP 130
>BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 232 FPMPAIRFRAD-TPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQAPTGEWKGV 408
+PMP F + + +A++EKEK W +LT EK ALYR F +T++E + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 409 VGWGLLIASLSVWIFMGMKLFVYSPLP 489
+G + + +++V+ P P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKP 132
>AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 232 FPMPAIRFRAD-TPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQAPTGEWKGV 408
+PMP F + + +A++EKEK W +LT EK ALYR F +T++E + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 409 VGWGLLIASLSVWIFMGMKLFVYSPLP 489
+G + + +++V+ P P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKP 132
>AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 precursor protein.
Length = 171
Score = 62.1 bits (144), Expect = 1e-09
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 232 FPMPAIRFRAD-TPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQAPTGEWKGV 408
+PMP F + + +A++EKEK W +LT EK ALYR F +T++E + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 409 VGWGLLIASLSVWIFMGMKLFVYSPLP 489
+G + + +++V+ P P
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKP 132
>BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein.
Length = 83
Score = 40.3 bits (90), Expect = 0.004
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 208 PNYVDRADFPMPAI-RFRADTPDIKAIREKEKSDWRKLTLEEK 333
P Y+DR D P+P + + + KA++EKEK+ W L+++EK
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEK 78
>BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein.
Length = 659
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSLQGSVCASHSSPSHG 284
R +S PSP P ++ W PG R+ LGR + L SV ++ G
Sbjct: 418 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRG 470
>BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein.
Length = 659
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSLQGSVCASHSSPSHG 284
R +S PSP P ++ W PG R+ LGR + L SV ++ G
Sbjct: 418 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRG 470
>AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing
protein 4 variant 2 protein.
Length = 659
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSLQGSVCASHSSPSHG 284
R +S PSP P ++ W PG R+ LGR + L SV ++ G
Sbjct: 418 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRG 470
>AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing
protein 4 protein.
Length = 673
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSLQGSVCASHSSPSHG 284
R +S PSP P ++ W PG R+ LGR + L SV ++ G
Sbjct: 432 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRG 484
>AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide
releasing protein 4 protein.
Length = 673
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSLQGSVCASHSSPSHG 284
R +S PSP P ++ W PG R+ LGR + L SV ++ G
Sbjct: 432 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQLVESVFKNYDPEGRG 484
>U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated protein
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 69 YGQLLAAPC--TVRCSPRTCLHQGRIIFSW 152
Y ++L C T RCSP C H GR SW
Sbjct: 530 YAEVLFDTCGITDRCSPNMCEHDGRCYQSW 559
>L24521-1|AAA36776.1| 368|Homo sapiens transformation-related
protein protein.
Length = 368
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 370 NMSGRMKLGRELSSLQGSVCASHSSPSHGLP*YQEC 263
N+ + KL +++ +CA HS+PS LP + C
Sbjct: 264 NVFNKRKLQKKILKTPNPLCALHSAPSPSLPPFLRC 299
>AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology domain
containing, family A member 6 protein.
Length = 1048
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = -3
Query: 462 HSHENPDRERC----NQQTPAHNSLP 397
HSHE PD E + Q P HNSLP
Sbjct: 174 HSHEKPDSENVPPSKHHQQPPHNSLP 199
>AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology domain
containing, family A member 6 protein.
Length = 1068
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = -3
Query: 462 HSHENPDRERC----NQQTPAHNSLP 397
HSHE PD E + Q P HNSLP
Sbjct: 194 HSHEKPDSENVPPSKHHQQPPHNSLP 219
>AL035071-2|CAM27373.1| 845|Homo sapiens DNA
(cytosine-5-)-methyltransferase 3 beta protein.
Length = 845
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 421 DPSPQLPSILRWGPGTRNMSGRMKL-GRELSSLQGSVCASHSSPS 290
+PSP+ PS+ TR+++G GRE S L C+ SS S
Sbjct: 2 EPSPEPPSLESMKGDTRHLNGEEDAGGREDSILVNGACSDQSSDS 46
>AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ39973 fis, clone SPLEN2028365, moderately
similar to Mus musculus ras activator RasGRP (Rasgrp)
mRNA. ).
Length = 202
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 439 RAMQSTDPSP-QLPSILRWGPGTRNMSGRMKLGRELSSL 326
R +S PSP P ++ W PG R+ LGR + L
Sbjct: 142 RCPKSLPPSPFNAPLVVEWAPGVTPKPDRVTLGRHVEQL 180
>AF176228-1|AAF04015.1| 845|Homo sapiens DNA cytosine-5
methyltransferase 3B protein.
Length = 845
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 421 DPSPQLPSILRWGPGTRNMSGRMKL-GRELSSLQGSVCASHSSPS 290
+PSP+ PS+ TR+++G GRE S L C+ SS S
Sbjct: 2 EPSPEPPSLESMKGDTRHLNGEEDAGGREDSILVNGACSDQSSDS 46
>AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein.
Length = 1091
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = -3
Query: 462 HSHENPDRERC----NQQTPAHNSLP 397
HSHE PD E + Q P HNSLP
Sbjct: 217 HSHEKPDSENVPPSKHHQQPPHNSLP 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,240,497
Number of Sequences: 237096
Number of extensions: 1957038
Number of successful extensions: 5029
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5017
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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