Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I15
         (107 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   3.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    18   8.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    18   8.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    18   8.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 69  CNVIWLMIKKSSWK*NLIDFFF 4
           CN +  ++K S+W+  L + +F
Sbjct: 249 CNGLKRVVKLSNWREPLPEAYF 270


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -1

Query: 107 NLDLFPYRTGSFH 69
           N    PY +G FH
Sbjct: 137 NYPAVPYGSGDFH 149


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -1

Query: 107 NLDLFPYRTGSFH 69
           N    PY +G FH
Sbjct: 138 NYPAVPYGSGDFH 150


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -1

Query: 107 NLDLFPYRTGSFH 69
           N    PY +G FH
Sbjct: 138 NYPAVPYGSGDFH 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,974
Number of Sequences: 336
Number of extensions: 318
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 16
effective length of database: 117,209
effective search space used:  2226971
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)