BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_I14 (263 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC068500-1|AAH68500.1| 658|Homo sapiens large subunit GTPase 1 ... 29 2.0 BC040119-1|AAH40119.1| 649|Homo sapiens LSG1 protein protein. 29 2.0 BC015042-1|AAH15042.1| 648|Homo sapiens Unknown (protein for IM... 29 2.0 AK002163-1|BAA92116.1| 642|Homo sapiens protein ( Homo sapiens ... 29 2.0 D85782-1|BAA12873.1| 200|Homo sapiens cysteine dioxygenase prot... 29 3.5 Z31357-1|CAA83234.1| 200|Homo sapiens cysteine dioxygenase type... 28 6.2 Z23010-1|CAA80552.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2 U80055-1|AAB58352.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2 D85777-1|BAA12872.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2 CR536540-1|CAG38777.1| 200|Homo sapiens CDO1 protein. 28 6.2 BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein. 28 6.2 BC024241-1|AAH24241.1| 200|Homo sapiens cysteine dioxygenase, t... 28 6.2 AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein pr... 28 6.2 AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein. 28 6.2 AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein. 28 6.2 AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein. 28 6.2 AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein. 28 6.2 AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein. 28 6.2 AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein. 28 6.2 AK123576-1|BAC85649.1| 897|Homo sapiens protein ( Homo sapiens ... 28 6.2 AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein. 28 6.2 BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein pr... 27 8.2 BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein. 27 8.2 AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein. 27 8.2 AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein. 27 8.2 AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens ... 27 8.2 AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 27 8.2 AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 27 8.2 >BC068500-1|AAH68500.1| 658|Homo sapiens large subunit GTPase 1 homolog (S. cerevisiae) protein. Length = 658 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257 KLN+KF P E R +FEE++ +IKK Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102 >BC040119-1|AAH40119.1| 649|Homo sapiens LSG1 protein protein. Length = 649 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257 KLN+KF P E R +FEE++ +IKK Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102 >BC015042-1|AAH15042.1| 648|Homo sapiens Unknown (protein for IMAGE:3920630) protein. Length = 648 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257 KLN+KF P E R +FEE++ +IKK Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102 >AK002163-1|BAA92116.1| 642|Homo sapiens protein ( Homo sapiens cDNA FLJ11301 fis, clone PLACE1009908, weakly similar to HYPOTHETICAL GTP-BINDING PROTEIN IN SEH1-PRP20 INTERGENIC ). Length = 642 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257 KLN+KF P E R +FEE++ +IKK Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102 >D85782-1|BAA12873.1| 200|Homo sapiens cysteine dioxygenase protein. Length = 200 Score = 28.7 bits (61), Expect = 3.5 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTXHAFDQRTGHKNKVTMTFHSKFGIR 188 >Z31357-1|CAA83234.1| 200|Homo sapiens cysteine dioxygenase type 1 protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >Z23010-1|CAA80552.1| 200|Homo sapiens cysteine dioxygenase protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >U80055-1|AAB58352.1| 200|Homo sapiens cysteine dioxygenase protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >D85777-1|BAA12872.1| 200|Homo sapiens cysteine dioxygenase protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >CR536540-1|CAG38777.1| 200|Homo sapiens CDO1 protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein. Length = 1494 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399 >BC024241-1|AAH24241.1| 200|Homo sapiens cysteine dioxygenase, type I protein. Length = 200 Score = 27.9 bits (59), Expect = 6.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22 VSLHL+SPP T A T H K SKF ++ Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188 >AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein protein. Length = 1333 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 200 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 237 >AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein. Length = 1323 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 190 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 227 >AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein. Length = 1491 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399 >AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein. Length = 1494 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399 >AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein. Length = 1323 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 190 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 227 >AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein. Length = 1491 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399 >AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein. Length = 1494 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399 >AK123576-1|BAC85649.1| 897|Homo sapiens protein ( Homo sapiens cDNA FLJ41582 fis, clone CTONG2020026, weakly similar to Drosophila melanogaster BcDNA.GH09358 (BcDNA.GH09358) mRNA. ). Length = 897 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 296 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 333 >AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein. Length = 1534 Score = 27.9 bits (59), Expect = 6.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16 P ++ S P AA+ T HN +H +K T+K S Sbjct: 405 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 442 >BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein protein. Length = 295 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 179 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 216 >BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein. Length = 510 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 227 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 264 >AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein. Length = 675 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248 >AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein. Length = 675 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248 >AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens cDNA FLJ31560 fis, clone NT2RI2001409, weakly similar to DYSTROPHIN. ). Length = 560 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 193 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 230 >AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. Length = 8749 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 3118 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3155 >AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. Length = 8797 Score = 27.5 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263 + + +G++KLN+ GEL T E+A+G K T Sbjct: 3111 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3148 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 36,435,000 Number of Sequences: 237096 Number of extensions: 681292 Number of successful extensions: 1394 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 1391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1394 length of database: 76,859,062 effective HSP length: 65 effective length of database: 61,447,822 effective search space used: 1351852084 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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