Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I14
(263 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068500-1|AAH68500.1| 658|Homo sapiens large subunit GTPase 1 ... 29 2.0
BC040119-1|AAH40119.1| 649|Homo sapiens LSG1 protein protein. 29 2.0
BC015042-1|AAH15042.1| 648|Homo sapiens Unknown (protein for IM... 29 2.0
AK002163-1|BAA92116.1| 642|Homo sapiens protein ( Homo sapiens ... 29 2.0
D85782-1|BAA12873.1| 200|Homo sapiens cysteine dioxygenase prot... 29 3.5
Z31357-1|CAA83234.1| 200|Homo sapiens cysteine dioxygenase type... 28 6.2
Z23010-1|CAA80552.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2
U80055-1|AAB58352.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2
D85777-1|BAA12872.1| 200|Homo sapiens cysteine dioxygenase prot... 28 6.2
CR536540-1|CAG38777.1| 200|Homo sapiens CDO1 protein. 28 6.2
BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein. 28 6.2
BC024241-1|AAH24241.1| 200|Homo sapiens cysteine dioxygenase, t... 28 6.2
AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein pr... 28 6.2
AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein. 28 6.2
AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein. 28 6.2
AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein. 28 6.2
AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein. 28 6.2
AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein. 28 6.2
AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein. 28 6.2
AK123576-1|BAC85649.1| 897|Homo sapiens protein ( Homo sapiens ... 28 6.2
AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein. 28 6.2
BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein pr... 27 8.2
BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein. 27 8.2
AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein. 27 8.2
AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein. 27 8.2
AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens ... 27 8.2
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 27 8.2
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 27 8.2
>BC068500-1|AAH68500.1| 658|Homo sapiens large subunit GTPase 1
homolog (S. cerevisiae) protein.
Length = 658
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257
KLN+KF P E R +FEE++ +IKK
Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102
>BC040119-1|AAH40119.1| 649|Homo sapiens LSG1 protein protein.
Length = 649
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257
KLN+KF P E R +FEE++ +IKK
Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102
>BC015042-1|AAH15042.1| 648|Homo sapiens Unknown (protein for
IMAGE:3920630) protein.
Length = 648
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257
KLN+KF P E R +FEE++ +IKK
Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102
>AK002163-1|BAA92116.1| 642|Homo sapiens protein ( Homo sapiens
cDNA FLJ11301 fis, clone PLACE1009908, weakly similar to
HYPOTHETICAL GTP-BINDING PROTEIN IN SEH1-PRP20
INTERGENIC ).
Length = 642
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 177 KLNVKFEPGELREAARTFEEARGKIKK 257
KLN+KF P E R +FEE++ +IKK
Sbjct: 77 KLNIKFVPAEARTGLLSFEESQ-RIKK 102
>D85782-1|BAA12873.1| 200|Homo sapiens cysteine dioxygenase
protein.
Length = 200
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTXHAFDQRTGHKNKVTMTFHSKFGIR 188
>Z31357-1|CAA83234.1| 200|Homo sapiens cysteine dioxygenase type 1
protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>Z23010-1|CAA80552.1| 200|Homo sapiens cysteine dioxygenase
protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>U80055-1|AAB58352.1| 200|Homo sapiens cysteine dioxygenase
protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>D85777-1|BAA12872.1| 200|Homo sapiens cysteine dioxygenase
protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>CR536540-1|CAG38777.1| 200|Homo sapiens CDO1 protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein.
Length = 1494
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399
>BC024241-1|AAH24241.1| 200|Homo sapiens cysteine dioxygenase, type
I protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 126 VSLHLHSPP--TGAALQATTMHNTKHNTRIFSKFTLK 22
VSLHL+SPP T A T H K SKF ++
Sbjct: 152 VSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIR 188
>AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein
protein.
Length = 1333
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 200 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 237
>AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein.
Length = 1323
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 190 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 227
>AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein.
Length = 1491
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399
>AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein.
Length = 1494
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399
>AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein.
Length = 1323
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 190 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 227
>AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein.
Length = 1491
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399
>AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein.
Length = 1494
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 362 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 399
>AK123576-1|BAC85649.1| 897|Homo sapiens protein ( Homo sapiens
cDNA FLJ41582 fis, clone CTONG2020026, weakly similar
to Drosophila melanogaster BcDNA.GH09358 (BcDNA.GH09358)
mRNA. ).
Length = 897
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 296 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 333
>AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein.
Length = 1534
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 129 PVSLHLHSPPTGAALQATTMHNTKHNTRIFSKFTLKLS 16
P ++ S P AA+ T HN +H +K T+K S
Sbjct: 405 PTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTS 442
>BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein
protein.
Length = 295
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 179 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 216
>BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 227 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 264
>AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248
>AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248
>AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ31560 fis, clone NT2RI2001409, weakly similar to
DYSTROPHIN. ).
Length = 560
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 193 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 230
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 3118 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3155
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 IEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 263
+ + +G++KLN+ GEL T E+A+G K T
Sbjct: 3111 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,435,000
Number of Sequences: 237096
Number of extensions: 681292
Number of successful extensions: 1394
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 76,859,062
effective HSP length: 65
effective length of database: 61,447,822
effective search space used: 1351852084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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