BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I14
(263 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113456-1|AAM29461.1| 616|Drosophila melanogaster RE36204p pro... 27 3.6
AE014298-2067|AAF48395.1| 616|Drosophila melanogaster CG9522-PA... 27 3.6
AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p pro... 26 6.3
AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA ... 26 6.3
AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p pro... 26 8.3
AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p pro... 26 8.3
AF231039-1|AAF34808.1| 268|Drosophila melanogaster SP558 protei... 26 8.3
AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD2363... 26 8.3
AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA ... 26 8.3
AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-P... 26 8.3
AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-P... 26 8.3
>AY113456-1|AAM29461.1| 616|Drosophila melanogaster RE36204p
protein.
Length = 616
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 64 IMHGGSLQGCTSGRRMKMKGNWSYSLV 144
I+ GG GCT R+ NWS L+
Sbjct: 54 IIVGGGAAGCTLAARLSENPNWSVFLI 80
>AE014298-2067|AAF48395.1| 616|Drosophila melanogaster CG9522-PA
protein.
Length = 616
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 64 IMHGGSLQGCTSGRRMKMKGNWSYSLV 144
I+ GG GCT R+ NWS L+
Sbjct: 54 IIVGGGAAGCTLAARLSENPNWSVFLI 80
>AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p
protein.
Length = 268
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 105 ANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKK 257
A+E G+L + V D + L K ++ AR +E RGKIKK
Sbjct: 107 ADERTGRL-VDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKK 156
>AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA
protein.
Length = 268
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 105 ANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKK 257
A+E G+L + V D + L K ++ AR +E RGKIKK
Sbjct: 107 ADERTGRL-VDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKK 156
>AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p protein.
Length = 1282
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 144 HQRIAPVSLHLHSPPTGAALQATTMHNTKH 55
HQ +AP H + +A T+HN H
Sbjct: 1001 HQNLAPYPAHASASSVCSAATTATVHNGSH 1030
>AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p protein.
Length = 2119
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 144 HQRIAPVSLHLHSPPTGAALQATTMHNTKH 55
HQ +AP H + +A T+HN H
Sbjct: 1838 HQNLAPYPAHASASSVCSAATTATVHNGSH 1867
>AF231039-1|AAF34808.1| 268|Drosophila melanogaster SP558 protein
protein.
Length = 268
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 NEDEGKLELFS-GVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKK 257
N DE L V D + L K ++ AR +E RGKIKK
Sbjct: 106 NADERTRRLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKK 156
>AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD23634
protein.
Length = 998
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 153 EKDASGENKLNVKFEPGELREAARTFEEARGKIKK 257
EK+A +L KF GE + FE+AR +I+K
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEK 570
>AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA
protein.
Length = 998
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 153 EKDASGENKLNVKFEPGELREAARTFEEARGKIKK 257
EK+A +L KF GE + FE+AR +I+K
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEK 570
>AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-PA
protein.
Length = 511
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 134 ILWCCH*ERCIWRKQTQCEIRAWRTERS 217
++WC +R + RK + +R WR ++
Sbjct: 22 LMWCDEKKRLVERKNAEESLRMWRRRKA 49
>AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-PA
protein.
Length = 2119
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 144 HQRIAPVSLHLHSPPTGAALQATTMHNTKH 55
HQ +AP H + +A T+HN H
Sbjct: 1838 HQNLAPYPAHASASSVCSAATTATVHNGSH 1867
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,039,654
Number of Sequences: 53049
Number of extensions: 188728
Number of successful extensions: 534
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -