Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I13
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...   113   1e-27
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   2.3  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    22   6.9  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    21   9.1  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score =  113 bits (273), Expect = 1e-27
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = +1

Query: 64  MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 231
           MG AN+WYSHPR+YGQGSR  RACSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 215 PISCAYSRKHCLQIFK 168
           P++CA   K+C + FK
Sbjct: 82  PVNCALDPKYCFKTFK 97


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 140 FEQARHEREPCPYLRGC 90
           F + +  REP PY+  C
Sbjct: 65  FCECKETREPLPYMYAC 81


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/37 (27%), Positives = 14/37 (37%)
 Frame = -3

Query: 185 CLQIFKPYLRMRPCLFEQARHEREPCPYLRGCEYQIF 75
           CL     +++ R C      H    C    GC  +IF
Sbjct: 356 CLSDSAIFVQSRNCNHHHGFHPSTVCKIPPGCSLKIF 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,573
Number of Sequences: 2352
Number of extensions: 7327
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)