Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I10
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.0  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   5.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.0  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 92  RNRTSRCTHKAR*MKSFPSFHPTTPSYG 9
           R  TS  T+ +R + +  S  PTT SYG
Sbjct: 88  RTSTSNPTYSSRSVMTSCSSVPTTASYG 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 166  YP*CWEIGCR 195
            YP CW++ C+
Sbjct: 1521 YPKCWQVDCK 1530



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 166  YP*CWEIGC 192
            YP CW++ C
Sbjct: 1946 YPKCWQVDC 1954



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 166  YP*CWEIGC 192
            YP CW++ C
Sbjct: 2444 YPKCWQVDC 2452



 Score = 20.6 bits (41), Expect = 7.0
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 166 YP*CWEIGCR 195
           YP CW+  C+
Sbjct: 758 YPVCWQSNCK 767


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 209 PPPERSDAETNYDEAVKNL 265
           P PE+ D E   DE  KNL
Sbjct: 404 PDPEKYDPERFSDENKKNL 422


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 47  ISFIVLCVCIGLSYCEDTY 103
           + F V CV + L+  ED Y
Sbjct: 5   VIFFVACVSVALARPEDQY 23


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 289 ISLSCCFRQIFYCLIVISF 233
           +S S  F+Q F+C   I F
Sbjct: 413 LSCSSFFQQFFHCYCPIKF 431


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 156 YPLKSTFLL 130
           YPLKSTF L
Sbjct: 319 YPLKSTFYL 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,531
Number of Sequences: 336
Number of extensions: 2279
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)