Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I10
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.29 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.87 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.0  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.1  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +2

Query: 29  GGTMERISFIVLCVCIGLSYCEDTYYKAGVIQDTSRNVD 145
           G  +ER    VLCV +GLS  E   Y   V Q T+  VD
Sbjct: 329 GAPIERPDHAVLCVYMGLSMVEAIKY---VQQTTNSPVD 364


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 253 CLIVISFSVRPFWWW*YYDI 194
           C  V+S+  RP+W W   D+
Sbjct: 828 CWEVMSYGERPYWNWSNQDV 847


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +3

Query: 30  VERWKGFHLSCFVCASACPIARTLTTRLV*YKTQAEMSISMDTYRLSMMLGNRV 191
           + R +G H+SC   A +  I       +V    + ++ +S D   LS +   +V
Sbjct: 111 IRRDRGLHVSCSFSAGSTIIREGDVGSIVYVMEEGKVEVSRDGKYLSTLAPGKV 164


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 WEIGCRYHSI 207
           WEIGC  +S+
Sbjct: 125 WEIGCDVYSV 134


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 WEIGCRYHSI 207
           WEIGC  +S+
Sbjct: 125 WEIGCDVYSV 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,371
Number of Sequences: 438
Number of extensions: 3002
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)