Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I07
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99211-1|CAA67601.1|  898|Drosophila melanogaster ubiquitin-spec...    27   8.2  
BT003784-1|AAO41467.1| 1556|Drosophila melanogaster LD26783p pro...    27   8.2  
AE014296-993|AAS65076.1| 1556|Drosophila melanogaster CG5486-PC,...    27   8.2  
AE014296-992|AAN12105.1| 1556|Drosophila melanogaster CG5486-PB,...    27   8.2  
AE014296-991|AAF50752.2| 1556|Drosophila melanogaster CG5486-PA,...    27   8.2  

>X99211-1|CAA67601.1|  898|Drosophila melanogaster
           ubiquitin-specific protease protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 250 LMRFDFDFFNYLKFLWNSR*TIEETVNLARF 158
           L RFDFD+    +   N R T  +T+NL  F
Sbjct: 255 LKRFDFDYQTMHRIKLNDRVTFPQTLNLNTF 285


>BT003784-1|AAO41467.1| 1556|Drosophila melanogaster LD26783p
           protein.
          Length = 1556

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 250 LMRFDFDFFNYLKFLWNSR*TIEETVNLARF 158
           L RFDFD+    +   N R T  +T+NL  F
Sbjct: 596 LKRFDFDYQTMHRIKLNDRVTFPQTLNLNTF 626


>AE014296-993|AAS65076.1| 1556|Drosophila melanogaster CG5486-PC,
           isoform C protein.
          Length = 1556

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 250 LMRFDFDFFNYLKFLWNSR*TIEETVNLARF 158
           L RFDFD+    +   N R T  +T+NL  F
Sbjct: 596 LKRFDFDYQTMHRIKLNDRVTFPQTLNLNTF 626


>AE014296-992|AAN12105.1| 1556|Drosophila melanogaster CG5486-PB,
           isoform B protein.
          Length = 1556

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 250 LMRFDFDFFNYLKFLWNSR*TIEETVNLARF 158
           L RFDFD+    +   N R T  +T+NL  F
Sbjct: 596 LKRFDFDYQTMHRIKLNDRVTFPQTLNLNTF 626


>AE014296-991|AAF50752.2| 1556|Drosophila melanogaster CG5486-PA,
           isoform A protein.
          Length = 1556

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 250 LMRFDFDFFNYLKFLWNSR*TIEETVNLARF 158
           L RFDFD+    +   N R T  +T+NL  F
Sbjct: 596 LKRFDFDYQTMHRIKLNDRVTFPQTLNLNTF 626


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,746,553
Number of Sequences: 53049
Number of extensions: 298764
Number of successful extensions: 439
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)