Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I07
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   0.84 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   0.84 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   5.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.8  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 155 WNFYIVTMYMWLINNV 108
           W+F + T+ +W IN +
Sbjct: 396 WSFIVSTILLWFINKI 411


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 33  RCPIP*YYFYQRCVSSQSTNYPT 101
           +CP P YY Y   ++  +T+ PT
Sbjct: 634 KCPYPSYYSYIGVLTLVATSMPT 656


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = -3

Query: 224 QLLKVPMEFKVNN*RNSKFSKIHWNFYIVTMYMWLINNV*IRWVIC 87
           +L+ +P  + V    N     +    YI+  ++ L+ N  + W+ C
Sbjct: 29  ELIHIPEHWLVYPEPNPSLHYLLALLYILFTFLALLGNGLVIWIFC 74


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 294 EPLLLIDFIYLIVKSIL 344
           EP+LLI +IY +   +L
Sbjct: 118 EPILLIAYIYHLYMGLL 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,098
Number of Sequences: 438
Number of extensions: 2073
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)