Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I05
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 68 1e-10
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 61 1e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 60 2e-08
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 50 2e-05
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 49 6e-05
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 48 8e-05
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 40 0.037
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.15
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 36 0.46
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 35 1.1
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 33 3.2
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 4.3
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 33 4.3
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 32 5.6
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 32 7.4
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 67.7 bits (158), Expect = 1e-10
Identities = 37/73 (50%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
EPYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 40 EPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEES 99
Query: 364 XXXDDDMGFGLFD 402
DDDMGFGLFD
Sbjct: 100 DQSDDDMGFGLFD 112
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/33 (84%), Positives = 33/33 (100%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILK 170
M++KAELACVY++LILVDDDVAVTGEKI+TILK
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILK 33
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSGV 270
EPYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 48 EPYWPGLFTKALEGINVKDLITNIGSGV 75
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 57 RITFKMASKAELACVYSALILVDDDVAVTGEKISTI 164
R T ++ A +C YSALIL DDDVAVT EKISTI
Sbjct: 6 RETSQVKITAIASCAYSALILFDDDVAVTDEKISTI 41
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 60.5 bits (140), Expect = 2e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSGV 270
EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 11 EPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 52.8 bits (121), Expect = 4e-06
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGS 264
EPYW LFAKALEGINV+DLITNIGS
Sbjct: 63 EPYWRALFAKALEGINVKDLITNIGS 88
Score = 39.5 bits (88), Expect = 0.037
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISTILK 170
VYSALILVDD VAVT EKISTILK
Sbjct: 36 VYSALILVDD-VAVTDEKISTILK 58
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISTILK 170
SK+ELACVY+AL+L DDD+ VT +KI+TILK
Sbjct: 2 SKSELACVYAALMLADDDIDVTADKINTILK 32
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGS 264
E Y P LFA +L G NV+DL+ ++GS
Sbjct: 40 ESYLPNLFATSLNGKNVKDLLMSMGS 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 48.8 bits (111), Expect = 6e-05
Identities = 28/72 (38%), Positives = 32/72 (44%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
EP W LFAKALEG +V+DL+ N+GSG
Sbjct: 40 EPIWTSLFAKALEGKDVKDLLLNVGSG-GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKE 98
Query: 367 XXDDDMGFGLFD 402
DDDMGFGLFD
Sbjct: 99 ESDDDMGFGLFD 110
Score = 32.7 bits (71), Expect = 4.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISTILKXXXXXXXXXXWS 206
S AELA Y+ALIL D+ + +T +K+ ++ W+
Sbjct: 2 SAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWT 44
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 48.4 bits (110), Expect = 8e-05
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 357
EP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 40 EPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKE 99
Query: 358 XXXXXDDDMGFGLFD 402
DDDMGFGLFD
Sbjct: 100 ESEESDDDMGFGLFD 114
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILK 170
MAS +ELAC+YSALIL DD+V VT +KI+ ++K
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIK 33
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 39.5 bits (88), Expect = 0.037
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISTILK 170
S +ELAC Y+ALIL DD + +T E IS ++K
Sbjct: 2 STSELACTYAALILHDDGIEITAENISKLVK 32
Score = 39.5 bits (88), Expect = 0.037
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGSG 267
E YWP LFAK E N+ DLI N+G+G
Sbjct: 39 ESYWPSLFAKLCEKKNIDDLIMNVGAG 65
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 37.5 bits (83), Expect = 0.15
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGS 264
EP W LFAKALEG +V+D++T + S
Sbjct: 41 EPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 35.9 bits (79), Expect = 0.46
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGS 264
EPY+PGLFA+AL NV D++ G+
Sbjct: 50 EPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDD 131
MAS +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 81 KAELACVYSALILVDDDVAVTGEKISTILK 170
+ EL CVYS+L+L DD + VT + I ++K
Sbjct: 14 REELMCVYSSLVLYDDGLDVTQDNILKLVK 43
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 4.3
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 90 LACVYSALILVDDDVAVT 143
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 32.7 bits (71), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISTIL 167
ELACVY+ALIL D D +T + + I+
Sbjct: 4 ELACVYAALILHDGDKEITADALQKII 30
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 32.3 bits (70), Expect = 5.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 81 KAELACVYSALILVDDDVAVTGEKISTILK 170
K EL C Y+ALIL ++ +++T E I ++K
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIK 43
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 31.9 bits (69), Expect = 7.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 187 EPYWPGLFAKALEGINVRDLITNIGS 264
E +WP + AKAL N+ DLI + GS
Sbjct: 43 EGFWPIIMAKALTNANIEDLIMDAGS 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,987,440
Number of Sequences: 1657284
Number of extensions: 5270961
Number of successful extensions: 10455
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10452
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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