Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I04
(486 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 295 9e-81
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 294 3e-80
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 287 2e-78
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 175 1e-44
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 142 1e-34
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 134 3e-32
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 133 8e-32
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 132 2e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 4e-31
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 130 4e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 103 1e-22
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 4e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 5e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 9e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 69 3e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 4e-11
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 62 2e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 51 6e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 1e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 4e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 32 0.22
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 30 0.88
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 30 1.2
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.5
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 29 2.7
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 28 3.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 4.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 4.7
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 27 6.2
SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2) 27 8.2
SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10) 27 8.2
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 8.2
SB_38370| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 295 bits (725), Expect = 9e-81
Identities = 133/140 (95%), Positives = 136/140 (97%)
Frame = +2
Query: 65 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKY 244
KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 332
Query: 425 VRNEAESCDCLQRFQLTHSL 484
VR EAESCDCLQ FQLTHSL
Sbjct: 333 VRKEAESCDCLQGFQLTHSL 352
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 294 bits (721), Expect = 3e-80
Identities = 133/139 (95%), Positives = 135/139 (97%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAESCDCLQ FQLTHSL
Sbjct: 121 RKEAESCDCLQGFQLTHSL 139
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 287 bits (705), Expect = 2e-78
Identities = 127/139 (91%), Positives = 135/139 (97%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAESCDC+Q FQLTHSL
Sbjct: 121 RKEAESCDCIQGFQLTHSL 139
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 3e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 343
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 175 bits (427), Expect = 1e-44
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +2
Query: 236 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 415
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 416 LDVVRNEAESCDCLQRFQLTHSL 484
LDVVR EAESCDC+Q FQLTHSL
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSL 84
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 142 bits (344), Expect = 1e-34
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +2
Query: 230 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 409
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 410 SVLDVVRNEAESCDCLQRFQLTHSL 484
++ DV+R EAE+CDC+Q QL +L
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQAL 95
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 134 bits (325), Expect = 3e-32
Identities = 64/140 (45%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 422 VVRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 121 RIRKLADQCTGLQGFLIFHS 140
Score = 132 bits (319), Expect = 1e-31
Identities = 62/139 (44%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 244
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 425 VRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 555 IRKLADQCTGLQGFLIFHS 573
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 133 bits (321), Expect = 8e-32
Identities = 63/145 (43%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Frame = +2
Query: 53 FRYIKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNE 226
F I RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 119
Query: 227 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 406
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 120 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 179
Query: 407 DSVLDVVRNEAESCDCLQRFQLTHS 481
D VLD +R A+ C LQ F + HS
Sbjct: 180 DLVLDRIRKLADQCTGLQGFLIFHS 204
Score = 133 bits (321), Expect = 8e-32
Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 422 VVRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 706 RIRKLADQCTGLQGFLIFHS 725
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 244
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 245 VPRAILVDLEPGTMDSV 295
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 132 bits (318), Expect = 2e-31
Identities = 61/139 (43%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 244
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 425 VRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 121 IRKLADQCTGLQGFLIFHS 139
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 130 bits (315), Expect = 4e-31
Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 422 VVRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 121 RLRKLADGCTGLQGFLIFHS 140
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 130 bits (315), Expect = 4e-31
Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 422 VVRNEAESCDCLQRFQLTHS 481
R A+ C LQ F + HS
Sbjct: 121 RCRKLADQCTGLQGFLIFHS 140
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 129 bits (312), Expect = 1e-30
Identities = 59/139 (42%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 244
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 425 VRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 540 IRKLADQCSGLQGFLVFHS 558
Score = 112 bits (269), Expect = 2e-25
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +2
Query: 113 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 286
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 287 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCLQRF 466
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +R A+ C LQ F
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 467 QLTHS 481
+ HS
Sbjct: 121 LIFHS 125
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 128 bits (310), Expect = 2e-30
Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 244
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 425 VRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 926 IRKLADQCTGLQGFLIFHS 944
Score = 128 bits (309), Expect = 2e-30
Identities = 61/139 (43%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 244
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 425 VRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 493 LRKLADGCTGLQGFLIFHS 511
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 103 bits (246), Expect = 1e-22
Identities = 56/140 (40%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 422 VVRNEAESCDCLQRFQLTHS 481
+R A+ C LQ F + HS
Sbjct: 111 RLRKLADQCSGLQGFFIFHS 130
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 97.9 bits (233), Expect = 4e-21
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +2
Query: 200 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 379
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 380 HYTEGAELVDSVLDVVRNEAESCDCLQRFQLTHS 481
HYT G E +D LD +R A+ C LQ F + HS
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHS 105
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 97.5 bits (232), Expect = 5e-21
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = +2
Query: 221 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 400
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 401 LVDSVLDVVRNEAESCDCLQRFQLTHS 481
+V+ V+D +R + C LQ F + HS
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHS 1051
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +2
Query: 287 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCLQRF 466
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +R A+ C LQ F
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 467 QLTHS 481
+ HS
Sbjct: 73 LIFHS 77
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 7e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 241
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 242 YVPRAILVDLEPGTMDSVR 298
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCLQRFQL 472
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +R A+ C LQ F +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 473 THS 481
HS
Sbjct: 63 FHS 65
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +2
Query: 347 QSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCLQRFQLTHSL 484
Q+ A NNWAKG YTEGAEL+DS +D +R AE+CD +Q FQ+ HSL
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSL 47
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 4e-11
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCLQRFQL 472
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +R A+ C LQ F +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 473 THS 481
HS
Sbjct: 63 FHS 65
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 62.5 bits (145), Expect = 2e-10
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Frame = +2
Query: 77 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 238
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 239 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 409
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 410 SVLDVVRNEAESCDCLQRFQLTHSL 484
VLD+V+ E E CD L F SL
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSL 147
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 57.6 bits (133), Expect = 5e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 430
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +R
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 48
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 430
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +R
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIR 48
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 235
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 236 GKY 244
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 125 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 226
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 1e-04
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Frame = +2
Query: 86 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 265
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 266 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 424
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 425 VRNEAESCDCLQRFQLTHSL 484
+R E E CD + HSL
Sbjct: 104 MRKEVERCDSFAGTIVMHSL 123
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 4e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 251 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 370
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 425 VRNEAESCDCLQRFQLTHSL 484
+R EAE CD +Q FQL HSL
Sbjct: 1 MRKEAEDCDAIQGFQLLHSL 20
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 30.3 bits (65), Expect = 0.88
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 151 VLIGDDLPELSSNLVSALSGLDVHDFPHFDISELNKLLNTNI 26
++I D+L S L + LSG + F H DI L +L T++
Sbjct: 45 LIISDELNHSSLVLGARLSGATIKVFKHNDIKSLENMLRTSV 86
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 0.88
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 312 PKGPERTESMVPGSRSTRMARGTYLP--PEA 226
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Frame = +3
Query: 75 KSCTSRPDNAETRLELSSGRSSPMSTASTPPVLT---TATQTCSWSASMFITMRXXXXXX 245
K T+ P A + ++P +T +T P T +TQT + A+ F++ +
Sbjct: 383 KPPTTTPSKATAPISDPMTTTTPTTTKATTPTTTKATASTQTAA-EANTFLSTQKTDATT 441
Query: 246 XXXXXXXXXXXXXXXXXXRDPSDRSSAPTTSFSDSPAPVTTGLRDTTRK 392
S ++ TT+ S S TT L +T K
Sbjct: 442 SQSTSTTEATKSQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTK 490
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSR 268
CPL ++L AP CP ++ +CP + P R
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCPLKEMLDTTYAPSKR 209
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 151 VLIGDDLPELSSNLVSALSGLDVHDFPHFDISELNKLLNTNI 26
++I D+L S L + LSG + F H DI L L T++
Sbjct: 188 LIISDELNHSSLVLGARLSGATIKVFKHNDIKSLENKLRTSV 229
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 393 PSV*CPLAQLLPAPD-CPKTKLSGRKICPKGPERTESMVPGSRSTRMARGTYLPPEA 226
P + P+ Q D CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 440 PGMTHPMGQPTAMGDLCPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -1
Query: 369 QLLPAPDCPKTKLSGRKICPKGPERTESMVPGSRSTR 259
Q +PA KT LS R+ K E+T S PG+R+TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 444 DSASLRTTSKTESTSSAPSV*CPLAQL 364
DSAS R +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 238
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 239 KYVPRAILVDLE 274
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 309 SDRSSAPTTSFSDSPAPVTTGLRDTT 386
++ S AP T SP P TT +R+T+
Sbjct: 1778 TESSKAPLTKLVSSPGPETTAVRETS 1803
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 137 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 277
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 357 APDCPKTKLSGRKICPKGPERTESMVPGSRST 262
A DCP ++ +GR +CP P +S + ++++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2)
Length = 372
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 148 LIGDDLPELSSNLVSALSGLDVHDFPHFDIS 56
+I +DLP+ + L L+ +V DF HF ++
Sbjct: 108 VIDEDLPKCGAVLFRGLNLYEVQDFAHFSLA 138
>SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10)
Length = 779
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 349 LSENEVVGAEDLSEGSRADRVHGAGLEV 266
LS VV EDL E + + GAGL+V
Sbjct: 194 LSRGGVVNQEDLYEALKNGEIRGAGLDV 221
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 182 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 295
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_38370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 461 VVNNHMTLLHCELRLRRNRL-AQHLPC 384
+VNN + +L L LRR RL A+H+ C
Sbjct: 130 IVNNELRILCGSLALRRGRLIARHVDC 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,423,589
Number of Sequences: 59808
Number of extensions: 279563
Number of successful extensions: 1048
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -