Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I04
(486 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 272 1e-73
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 268 1e-72
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 268 1e-72
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 267 3e-72
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 266 4e-72
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 266 4e-72
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 265 9e-72
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 264 2e-71
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 264 2e-71
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 132 1e-31
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 132 1e-31
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 130 5e-31
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 129 1e-30
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 129 1e-30
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 126 6e-30
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 126 6e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 115 2e-26
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 114 3e-26
At4g37190.1 68417.m05265 expressed protein 34 0.058
At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340... 29 1.7
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.7
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 2.2
At1g08320.1 68414.m00920 bZIP family transcription factor contai... 28 3.8
At4g36050.2 68417.m05132 endonuclease/exonuclease/phosphatase fa... 27 5.1
At4g36050.1 68417.m05131 endonuclease/exonuclease/phosphatase fa... 27 5.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.1
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 27 5.1
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 27 5.1
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 6.7
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 27 6.7
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 27 6.7
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 6.7
At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid t... 27 6.7
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 27 8.9
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 8.9
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 272 bits (666), Expect = 1e-73
Identities = 118/140 (84%), Positives = 133/140 (95%), Gaps = 1/140 (0%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 244
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 425 VRNEAESCDCLQRFQLTHSL 484
VR EAE+CDCLQ FQ+ HSL
Sbjct: 121 VRKEAENCDCLQGFQVCHSL 140
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 268 bits (658), Expect = 1e-72
Identities = 117/139 (84%), Positives = 131/139 (94%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 268 bits (658), Expect = 1e-72
Identities = 119/140 (85%), Positives = 131/140 (93%), Gaps = 1/140 (0%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 244
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 245 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 425 VRNEAESCDCLQRFQLTHSL 484
VR EAE+CDCLQ FQ+ HSL
Sbjct: 121 VRKEAENCDCLQGFQVCHSL 140
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 267 bits (654), Expect = 3e-72
Identities = 119/139 (85%), Positives = 129/139 (92%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 266 bits (653), Expect = 4e-72
Identities = 117/139 (84%), Positives = 129/139 (92%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 266 bits (653), Expect = 4e-72
Identities = 117/139 (84%), Positives = 129/139 (92%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 265 bits (650), Expect = 9e-72
Identities = 119/139 (85%), Positives = 129/139 (92%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+ DCLQ FQ+ HSL
Sbjct: 121 RKEAENSDCLQGFQVCHSL 139
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 264 bits (648), Expect = 2e-71
Identities = 116/139 (83%), Positives = 130/139 (93%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 264 bits (647), Expect = 2e-71
Identities = 115/139 (82%), Positives = 129/139 (92%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 247
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 248 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RNEAESCDCLQRFQLTHSL 484
R EAE+CDCLQ FQ+ HSL
Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 132 bits (319), Expect = 1e-31
Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
VR A++C LQ F
Sbjct: 121 RVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 132 bits (319), Expect = 1e-31
Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
VR A++C LQ F
Sbjct: 121 RVRKLADNCTGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 5e-31
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 422 VVRNEAESCDCLQRF 466
+R A++C LQ F
Sbjct: 121 RLRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 129 bits (311), Expect = 1e-30
Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
+R A++C LQ F
Sbjct: 121 RIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 129 bits (311), Expect = 1e-30
Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
+R A++C LQ F
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 126 bits (305), Expect = 6e-30
Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
+R A++C LQ F
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 126 bits (305), Expect = 6e-30
Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 241
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRNEAESCDCLQRF 466
+R A++C LQ F
Sbjct: 121 RIRKLADNCTGLQGF 135
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 115 bits (276), Expect = 2e-26
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 250
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 251 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 424
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 425 VRNEAESCDCLQRFQLTHSL 484
+ EA+ D L+ F L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 114 bits (275), Expect = 3e-26
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 71 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 250
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 251 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 424
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 425 VRNEAESCDCLQRFQLTHSL 484
+ EA+ D L+ F L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.058
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 68 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 235
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 236 GKYVPRAILVDLEP--GTMDS 292
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340:
Protein of unknown function (DUF740)
Length = 521
Score = 29.1 bits (62), Expect = 1.7
Identities = 29/96 (30%), Positives = 42/96 (43%)
Frame = +2
Query: 158 DPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNF 337
+ G +HG L ER N S Y P + LE G+ V G++ + D F
Sbjct: 289 ETVGLFHGAKLLVTERELRDSNWYSIKNYKPES----LELGSK-GVGCVAAGEVKKQDGF 343
Query: 338 VFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAES 445
G +G NW+KG G L+ DV +NE ++
Sbjct: 344 --GLKKSGKNWSKGWNFWG--LIQRKTDVAKNEMKT 375
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 401 LVDSVLDVVRNEAESCDCLQRFQLTHS 481
+++SV VVR EAE+C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 465 NRCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 286
N + DSA+ ++S ++ S+ S + PAP P L ICP G +
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 285 MVPG-SRSTRMARGT 244
M SRS + GT
Sbjct: 154 MTQSRSRSDVLGSGT 168
>At1g08320.1 68414.m00920 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 481
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 420 SKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSRSTRMARGTY 241
+ + STS PS LA P+ D K SG+++ K R +R +R+ + Y
Sbjct: 141 ANSSSTSGLPSTSRTLAPPKPSEDKRKATTSGKQLDAKTLRRLAQNREAARKSRLRKKAY 200
Query: 240 L 238
+
Sbjct: 201 V 201
>At4g36050.2 68417.m05132 endonuclease/exonuclease/phosphatase
family protein
Length = 609
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 328 GAEDLSEGSRADRVHGAG--LEVDEDGAGH 245
GAE + GSR D + AG L DED GH
Sbjct: 254 GAEQFNYGSRIDHILVAGSCLHQDEDKQGH 283
>At4g36050.1 68417.m05131 endonuclease/exonuclease/phosphatase
family protein
Length = 408
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 328 GAEDLSEGSRADRVHGAG--LEVDEDGAGH 245
GAE + GSR D + AG L DED GH
Sbjct: 53 GAEQFNYGSRIDHILVAGSCLHQDEDKQGH 82
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 74 EIVHIQAGQCGNQIGAKFWEIISD 145
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 191 SLSRRGKHRWGRCRAHR 141
SL+RRGKH W CR R
Sbjct: 645 SLTRRGKHSWRICRKLR 661
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 191 SLSRRGKHRWGRCRAHR 141
SL+RRGKH W CR R
Sbjct: 645 SLTRRGKHSWRICRKLR 661
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 116 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 265
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 450 SHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKI--CPKG-PERTESM 283
SH + + TT+ + STSS+ SV ++ P+P +T S + P P+R++S+
Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRSQSV 115
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 450 SHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKI--CPKG-PERTESM 283
SH + + TT+ + STSS+ SV ++ P+P +T S + P P+R++S+
Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRSQSV 115
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 89 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 181
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At1g18280.1 68414.m02282 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein GI:2627141 from (Picea abies); contains
Pfam profile PF00234 Protease inhibitor/seed storage/LTP
family
Length = 180
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 75 KSCTSRPDNAETRLELSSGRSS-PMSTASTPPVLTTATQTCSWS 203
K+C ++ D + + + SS P +T TPP +T+T T S S
Sbjct: 102 KACGAKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTGSGS 145
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = -1
Query: 447 HDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSR 268
HD S + T S+ ++PS+ L L P K S + CP+ P S P S
Sbjct: 494 HDHGSCKDEESTSSSPASPSI-SFLPTLHPLTSSQPKKASPQ--CPQSPTPVHSNGPPSA 550
Query: 267 STRMARGTYLPP 232
+ + LPP
Sbjct: 551 EAAVT-SSPLPP 561
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 168 PVGSMPCSSEMISQNLAPIW 109
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,995,580
Number of Sequences: 28952
Number of extensions: 196252
Number of successful extensions: 758
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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