Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I03
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   4.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   9.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.4  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 148 GLSNNTWLFNLSRTFP 101
           GLS+  W++  S T P
Sbjct: 542 GLSHGNWIYPASMTIP 557


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 287 SSPTPWAGDLHT 322
           S+PTPW+ D  T
Sbjct: 567 SNPTPWSEDAMT 578


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 162 VSHMWVCQTTLGC 124
           V++   C+TT+GC
Sbjct: 158 VANEMFCETTIGC 170


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 90  SSSWLCRHR 64
           S+ W+C HR
Sbjct: 375 SNGWICEHR 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,276
Number of Sequences: 438
Number of extensions: 1810
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)