Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_I02
(549 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 217 1e-55
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 146 4e-34
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 120 3e-26
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 118 1e-25
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 110 2e-23
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 80 4e-14
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 78 2e-13
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 77 4e-13
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 75 1e-12
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 71 1e-11
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 69 5e-11
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 69 5e-11
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 56 3e-10
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 66 7e-10
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 63 4e-09
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 61 2e-08
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 60 4e-08
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 60 4e-08
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 55 1e-06
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 54 3e-06
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 52 7e-06
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 50 5e-05
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 48 2e-04
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 40 0.029
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 39 0.088
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 38 0.15
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 36 0.47
UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2; ... 35 1.4
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 1.4
UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Sl... 33 4.4
UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 217 bits (531), Expect = 1e-55
Identities = 105/149 (70%), Positives = 113/149 (75%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 281
RNYDLGNGV+RFSKS+M+HKKA YKF+G TVVVKQIGGEKNGGTRTV L
Sbjct: 30 RNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPL 89
Query: 282 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 461
K RKSFYPTQ+KIR S G+ FSKHVRR RPNL GTVCILLAGRHAGKR
Sbjct: 90 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 149
Query: 462 XXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGPFAFN+CPLRRIPQRYVIGTST+
Sbjct: 150 LLLVTGPFAFNSCPLRRIPQRYVIGTSTR 178
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 146 bits (353), Expect = 4e-34
Identities = 73/148 (49%), Positives = 91/148 (61%)
Frame = +3
Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGPFA N+CPLRR+ QRYVIGTS+K
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSK 170
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 120 bits (288), Expect = 3e-26
Identities = 67/155 (43%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 443
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 444 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGP N PLRR Q++VI TSTK
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTK 200
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 118 bits (283), Expect = 1e-25
Identities = 64/151 (42%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 281
+N+ L GV FS+S+M+HK+ ++K V VK++ GEKNGG R + L
Sbjct: 26 KNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPL 85
Query: 282 KSRKSFYPTQDKIRGR--SHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXX 455
K + YPT+D + + SH K S+ R +TPGTV ILLAG H GKR
Sbjct: 86 KKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLK 145
Query: 456 XXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGP+ N CPLRRI Q YVI TSTK
Sbjct: 146 TGLLPVTGPYGVNGCPLRRINQIYVIATSTK 176
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 110 bits (264), Expect = 2e-23
Identities = 62/148 (41%), Positives = 80/148 (54%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 281
RN +L G+ R+S+S +Y K+A+YK T K IGG+KNGG R V +
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 282 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 461
+ +YPT+D R ++ K + + R ++TPGTV ILLAG H GKR
Sbjct: 70 QRESRYYPTEDVRRRLANRKK--PGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 462 XXXFTGPFAFNACPLRRIPQRYVIGTST 545
TGPF N PLRRIPQ YVI TST
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATST 155
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 79.8 bits (188), Expect = 4e-14
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 225 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFS-KHVRRTRPNLTPGTVCI 401
V+ K+IGG+KNGGTR V + FYP + + R H + + K+ + R +L PGT+ I
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQK-RFHRRLVNNKNPPKIRKSLQPGTILI 102
Query: 402 LLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
LLAG + GKR +GP N PLRR+ Q+ VI TST+
Sbjct: 103 LLAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTR 151
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 77.8 bits (183), Expect = 2e-13
Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Frame = +3
Query: 246 GEKNGGTRTVLLKSRKSF---YPTQD---KIRGRSHGKSFSKHVRRTRPNLTPGTVCILL 407
G + T+ L+K + F Y TQ K+R R K FS HVR+ R ++ PGTV ILL
Sbjct: 42 GLRTPKTKEALVKPKTRFPRSYVTQQGKRKLRLR-RAKCFSNHVRKIRSSIQPGTVLILL 100
Query: 408 AGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
AG H GKR TGPF +N PLRR+ Q YVI TST+
Sbjct: 101 AGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTR 147
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 76.6 bits (180), Expect = 4e-13
Identities = 44/107 (41%), Positives = 54/107 (50%)
Frame = +3
Query: 225 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCIL 404
++ K IGG KNGG R V K +YP DK K+ K + RP++ GT+ IL
Sbjct: 22 MIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVIL 80
Query: 405 LAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 545
LAG G R TGP+A N PL R+ QRYVI TST
Sbjct: 81 LAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATST 127
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 74.5 bits (175), Expect = 1e-12
Identities = 50/149 (33%), Positives = 70/149 (46%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 281
RN DL GV ++S+S+MYHK+ ++ + V +
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPV------------- 58
Query: 282 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 461
+ FYP +D ++ + +K + R ++TPGTV I+LAGR GKR
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
Query: 462 XXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGPF N PLRR+ Q YVIGTSTK
Sbjct: 117 LLLVTGPFKINGVPLRRVNQAYVIGTSTK 145
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +3
Query: 345 FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 524
F+ H RR R ++TPG V ILLAGRH KR TGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 525 YVIGTSTK 548
YVI T T+
Sbjct: 146 YVIATKTR 153
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 69.3 bits (162), Expect = 5e-11
Identities = 42/96 (43%), Positives = 49/96 (51%)
Frame = +3
Query: 261 GTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXX 440
G R + K+ K +IR + K K R ++TPGTV I+LAGR AGKR
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 441 XXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGPF N PLRRI QRYVI TSTK
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTK 147
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 69.3 bits (162), Expect = 5e-11
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +3
Query: 222 TVVVKQIGGEKN--GGTRTVLLKSRKS--FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPG 389
T+ K +G K G R + S+K+ +YP D+ + + K+ H + RP+L PG
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARKT--AHPTKLRPSLQPG 61
Query: 390 TVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 545
T+ ILLAGR GKR TGPF N PLRR+ RYVI TS+
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSS 113
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 56.0 bits (129), Expect(2) = 3e-10
Identities = 39/100 (39%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 252 KNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKR 431
K G + K + P + G SK V R LTPGTV I+LAGRH GKR
Sbjct: 31 KKGEKKPKFTKDTSAKLPKLQR-NGTKFALGHSKTVT-LRKTLTPGTVLIVLAGRHKGKR 88
Query: 432 XXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTSTK 548
TGP N PLRRI Q +VI TS K
Sbjct: 89 VVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSLK 128
Score = 30.7 bits (66), Expect(2) = 3e-10
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKK 164
RN+DL GVLRFS SR+ KK
Sbjct: 12 RNFDLSPGVLRFSASRLRLKK 32
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 65.7 bits (153), Expect = 7e-10
Identities = 37/88 (42%), Positives = 45/88 (51%)
Frame = +3
Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
S FYP D ++ R + + R ++TPGTV ILLAGR GKR
Sbjct: 49 SAPKFYPADD-VKPRQPSTR-KPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGL 106
Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTSTK 548
TGPF N P+RR+ Q YVI TSTK
Sbjct: 107 LLVTGPFKINGVPIRRVNQPYVIATSTK 134
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 63.3 bits (147), Expect = 4e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +3
Query: 297 FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 476
+YP++D + K+ ++ R +L PGTV ILLAGR GKR +
Sbjct: 9 WYPSEDVAALKKTRKA--ARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 477 GPFAFNACPLRRIPQRYVIGTSTK 548
GPF N PLRR+ RYVI TSTK
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTK 90
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = +3
Query: 336 GKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRI 515
G+ ++ V + R +L PG V ILL G + GKR TGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 516 PQRYVIGTST 545
RYVI TST
Sbjct: 90 NSRYVIATST 99
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +3
Query: 363 RTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 542
+ R +L PG VCILLAG + GKR TGP+A N P+RR+ Y+I TS
Sbjct: 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATS 93
Query: 543 TK 548
TK
Sbjct: 94 TK 95
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/60 (51%), Positives = 32/60 (53%)
Frame = +3
Query: 369 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
R L PGTV ILLAGR GKR TGPF N PLRR+ RYVI TS K
Sbjct: 36 RSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQK 95
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 54.8 bits (126), Expect = 1e-06
Identities = 45/148 (30%), Positives = 63/148 (42%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 281
RN L G R+S +Y +K Y V V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 282 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 461
+ K + + + +F KH + N TP TV I++ G+H +R
Sbjct: 107 QKMKMYL---GSCKAMAKSPAF-KH-EKAVCNSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 462 XXXFTGPFAFNACPLRRIPQRYVIGTST 545
TGP A N L R Q+ V+ TST
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITST 187
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 53.6 bits (123), Expect = 3e-06
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 228 VVKQIGGEKNGGTRTVLLKSRKSFYPTQDK--IRGRSHGKSFS---KHV--RRTRPNLTP 386
VV G +KN V+ +K P + K I + +G+ + K V R+ R ++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 387 GTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 545
G V I+L G+H GKR GP+ N PL+R+ RY+I TST
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTST 129
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 52.4 bits (120), Expect = 7e-06
Identities = 27/61 (44%), Positives = 31/61 (50%)
Frame = +3
Query: 366 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 545
T + PG V ILL+GR GKR TGPF N PL+R+ YVI TST
Sbjct: 54 TLRKIVPGQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTST 113
Query: 546 K 548
K
Sbjct: 114 K 114
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = +3
Query: 375 NLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 548
++TP TV I+L GRH GKR TGP A N PL R+ Q VI T TK
Sbjct: 8 SITPQTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTK 65
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 369 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 545
R + PG + I+LAGR G+R +GP +N P+RRI RYVI TST
Sbjct: 30 RKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATST 89
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 40.3 bits (90), Expect = 0.029
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +3
Query: 366 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 545
TRP+L GTV I++ G H GKR GP P+ I Q Y+I TST
Sbjct: 52 TRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP----VVPVNEISQDYLIATST 107
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 38.7 bits (86), Expect = 0.088
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +3
Query: 357 VRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIG 536
VRRT +L G V ++L G A +R GP + N PL RI +RY++
Sbjct: 22 VRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLA 79
Query: 537 TST 545
TST
Sbjct: 80 TST 82
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 37.9 bits (84), Expect = 0.15
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 471 FTGPFAFNACPLRRIPQRYVIGTSTK 548
F GPF+ N P+RRI Q++V+ TSTK
Sbjct: 13 FLGPFSINGVPVRRIAQKFVLPTSTK 38
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 36.3 bits (80), Expect = 0.47
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +3
Query: 474 TGPFAFNACPLRRIPQRYVIGTSTK 548
TG F N PLRR+ Q YVI TSTK
Sbjct: 172 TGSFKINGVPLRRVNQAYVIATSTK 196
>UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2;
Zymomonas mobilis|Rep: Putative uncharacterized protein
- Zymomonas mobilis
Length = 390
Score = 34.7 bits (76), Expect = 1.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 320 DLVLSGVE*FPAFQQDCTSASILFTAYLLNHDGWFLG 210
+ LS + F A QD TSA I + YLL H WF G
Sbjct: 339 EYALSDIVYFGALLQDKTSADIAYYDYLLGHSRWFSG 375
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 34.7 bits (76), Expect = 1.4
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 366 TRPNLTPGTVCILLAGRHAGKR 431
++P + PG VCI+L GRHAGK+
Sbjct: 2 SQPIIKPGLVCIVLQGRHAGKK 23
>UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1723
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 97 NRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKSPRNQPS 228
N G TSE + ++ + G T +++ + +R R SPR QP+
Sbjct: 1569 NNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPT 1612
>UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 181
Score = 32.3 bits (70), Expect = 7.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 257 WRHSYSPAEKQEIILPHSGQDQGSFSWQE 343
W + PA +Q ++L +SG+D GS W +
Sbjct: 66 WAIQFDPAGRQYVVLSNSGEDAGSEDWTD 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,327,079
Number of Sequences: 1657284
Number of extensions: 11200876
Number of successful extensions: 30334
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 29304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30314
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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