Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I02
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   146   2e-35
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   146   2e-35
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   107   7e-24
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P...    33   0.19 
BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p pro...    31   1.0  
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    29   4.1  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  146 bits (353), Expect = 2e-35
 Identities = 73/148 (49%), Positives = 91/148 (61%)
 Frame = +3

Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
           N  L  G+LR+SK++MY ++A+Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
             K+ YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR           
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTSTK 548
              TGPFA N+CPLRR+ QRYVIGTS+K
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSK 170


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  146 bits (353), Expect = 2e-35
 Identities = 73/148 (49%), Positives = 91/148 (61%)
 Frame = +3

Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
           N  L  G+LR+SK++MY ++A+Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
             K+ YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR           
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTSTK 548
              TGPFA N+CPLRR+ QRYVIGTS+K
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSK 170


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  107 bits (258), Expect = 7e-24
 Identities = 63/148 (42%), Positives = 84/148 (56%)
 Frame = +3

Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
           N  L  G+LR+SK++MY ++A+Y+               + VV++           V +K
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63

Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
             K+ YPT+  ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR           
Sbjct: 64  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123

Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTSTK 548
              TGPFA N+CPLRR+ QRYVIGTS+K
Sbjct: 124 LLVTGPFALNSCPLRRVSQRYVIGTSSK 151


>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
            isoform B protein.
          Length = 1346

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 73   VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 249
            +S S   AN+ I  S T  S SP+AG     L I SL +R+     + +  P  +SK  V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163

Query: 250  KRMEALVQSC*KAGNHSTPLRTRS 321
              +E  +++  K     +P  + S
Sbjct: 1164 VHLETPLRNGRKRVLRRSPSNSNS 1187


>BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p
           protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 452 QHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAMRTTPDLVLS 306
           +H NEH  +   + R+ N++ +  +VRS P  +F        TPD  LS
Sbjct: 323 RHVNEHQGVLPFTKRKYNSYTS-LQVRSTPMPIFNHPNGFANTPDAFLS 370


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -3

Query: 523 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 386
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,043,140
Number of Sequences: 53049
Number of extensions: 541955
Number of successful extensions: 1339
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)