Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_I01
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   250   7e-67
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   250   7e-67
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   250   7e-67
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   250   7e-67
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   247   7e-66
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    93   3e-19
AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p pro...    30   2.3  
AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA...    30   2.3  
AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p pro...    28   9.4  
AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p pro...    28   9.4  
AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA...    28   9.4  
AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-P...    28   9.4  
AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-P...    28   9.4  
AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-P...    28   9.4  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  250 bits (613), Expect = 7e-67
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 404
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 405 RGMRHYWGLRV 437
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  250 bits (613), Expect = 7e-67
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 404
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 405 RGMRHYWGLRV 437
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  250 bits (613), Expect = 7e-67
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 404
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 405 RGMRHYWGLRV 437
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  250 bits (613), Expect = 7e-67
 Identities = 115/131 (87%), Positives = 126/131 (96%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 404
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 405 RGMRHYWGLRV 437
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  247 bits (605), Expect = 7e-66
 Identities = 114/131 (87%), Positives = 125/131 (95%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 404
           EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 405 RGMRHYWGLRV 437
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +3

Query: 141 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 284
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 316 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 158
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 316 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 158
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p
           protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 294 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 383
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 294 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 383
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-PC,
           isoform C protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-PB,
           isoform B protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-PA,
           isoform A protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,883,999
Number of Sequences: 53049
Number of extensions: 401126
Number of successful extensions: 1053
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)