Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H23
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U30610-1|AAC50291.1|  179|Homo sapiens CD94 protein protein.           33   0.52 
BC028009-1|AAH28009.1|  179|Homo sapiens killer cell lectin-like...    33   0.52 
AY327501-1|AAQ93007.1|  158|Homo sapiens killer cell lectin-like...    33   0.52 
AY227806-1|AAP57386.1|  179|Homo sapiens killer cell lectin-like...    33   0.52 
AJ000673-1|CAA04230.1|  124|Homo sapiens C-type lectin protein.        33   0.52 
AB009597-1|BAA24450.1|  148|Homo sapiens CD94 protein.                 33   0.52 
AJ000001-1|CAA03845.1|  180|Homo sapiens CD94-B protein protein.       29   8.5  

>U30610-1|AAC50291.1|  179|Homo sapiens CD94 protein protein.
          Length = 179

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 93  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 152

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 153 IAYNPNGNALD 163


>BC028009-1|AAH28009.1|  179|Homo sapiens killer cell lectin-like
           receptor subfamily D, member 1 protein.
          Length = 179

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 93  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 152

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 153 IAYNPNGNALD 163


>AY327501-1|AAQ93007.1|  158|Homo sapiens killer cell lectin-like
           receptor subfamily D member 1 transcript variant 4
           protein.
          Length = 158

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 72  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 131

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 132 IAYNPNGNALD 142


>AY227806-1|AAP57386.1|  179|Homo sapiens killer cell lectin-like
           receptor subfamily D isoform C protein.
          Length = 179

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 93  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 152

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 153 IAYNPNGNALD 163


>AJ000673-1|CAA04230.1|  124|Homo sapiens C-type lectin protein.
          Length = 124

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 38  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 97

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 98  IAYNPNGNALD 108


>AB009597-1|BAA24450.1|  148|Homo sapiens CD94 protein.
          Length = 148

 Score = 33.5 bits (73), Expect = 0.52
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 335 KSTVTSTENNKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQP 502
           KS++   +N    +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+   
Sbjct: 62  KSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNC 121

Query: 503 LVHNANGYKLN 535
           + +N NG  L+
Sbjct: 122 IAYNPNGNALD 132


>AJ000001-1|CAA03845.1|  180|Homo sapiens CD94-B protein protein.
          Length = 180

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
 Frame = +2

Query: 335 KSTVTSTEN-NKGTEFLSSMKAIAFLDSGFSDTINSWVLPNGAVTA----VSFQVNNSSQ 499
           KS++   +N ++  +F+SS +   ++   +S+   +W+  NG+  +     SF+  N+  
Sbjct: 93  KSSLLQLQNTDELQDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKN 152

Query: 500 PLVHNANGYKLN 535
            + +N NG  L+
Sbjct: 153 CIAYNPNGNALD 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,240,704
Number of Sequences: 237096
Number of extensions: 1405720
Number of successful extensions: 2361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)