Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H21
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.82 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   2.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 354 ANCTTTYCLCTH 319
           +NC   YC CTH
Sbjct: 496 SNCENEYCECTH 507


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -1

Query: 216 CELFLNISSRFK*LHSFDHLEVTDLLEIWMFGCMVVFLSYHDSL 85
           C   L+ + +F  L +F  LE+ D   +  F C+   +S  + L
Sbjct: 315 CYRLLSRNGQFIYLRTFGFLEIDDQGTVESFVCVNTLVSEQEGL 358


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -3

Query: 370 LEHQACQLHHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNTS 230
           ++H    + +D+ SLY +    L+V +      +F  +Q    + TS
Sbjct: 156 IDHTESNIINDMCSLYYILQITLIVNYALALKNRFKELQKYLKIETS 202


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -2

Query: 296 TISGGKCRKILRYSIPSFVKYQYKCLHANCSLTYPLDLSDCIALITWRLRI 144
           T+  G  R I  ++IPS +++     +    +T   D  D      W L++
Sbjct: 566 TLKIGVYRNIKNFNIPSILQFNDGLKNLEIHVTKDTDTLDNEMRGAWPLKL 616


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,014
Number of Sequences: 336
Number of extensions: 2355
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)