Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H20
(464 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 3.2
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 4.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 4.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 4.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 4.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 20 9.8
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 20 9.8
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -2
Query: 187 HHGVYKRTSPSGN*HFPLPNGWSPQAS*SH 98
HH + + FPL G SP AS H
Sbjct: 24 HHHEQSAAAAAAYRSFPLSLGMSPYASSQH 53
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 4.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 121 TTHLGAENVNFQMETYVYKRRGDGT 195
T L N N+ TY+ K G G+
Sbjct: 272 TFTLSNSNTNYNPGTYINKEAGGGS 296
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 4.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3
Query: 432 NTINSLGSRNAAWIWLVN 379
N I++ W+WL+N
Sbjct: 121 NPIHTSSYMTGIWVWLIN 138
Score = 20.2 bits (40), Expect = 9.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 411 SRNAAWIWLV 382
S AWIWLV
Sbjct: 214 SHQHAWIWLV 223
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 4.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3
Query: 432 NTINSLGSRNAAWIWLVN 379
N I++ W+WL+N
Sbjct: 354 NPIHTSSYMTGIWVWLIN 371
Score = 20.2 bits (40), Expect = 9.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 411 SRNAAWIWLV 382
S AWIWLV
Sbjct: 447 SHQHAWIWLV 456
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 4.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3
Query: 432 NTINSLGSRNAAWIWLVN 379
N I++ W+WL+N
Sbjct: 354 NPIHTSSYMTGIWVWLIN 371
Score = 20.2 bits (40), Expect = 9.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 411 SRNAAWIWLV 382
S AWIWLV
Sbjct: 447 SHQHAWIWLV 456
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 426 INSLGSRNAAWIWLV 382
+N S AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 426 INSLGSRNAAWIWLV 382
+N S AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 426 INSLGSRNAAWIWLV 382
+N S AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 426 INSLGSRNAAWIWLV 382
+N S AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 20.2 bits (40), Expect = 9.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 270 WILHGDNSTSSEYKLFPCT 214
W+L G T + K F CT
Sbjct: 21 WLLQGHIRTHTGEKPFSCT 39
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 20.2 bits (40), Expect = 9.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 115 AATTHLGAENVNFQMETYVYKRRGDGTH 198
AAT HLG+ E++ + TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,466
Number of Sequences: 336
Number of extensions: 2032
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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