Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H19
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 180 2e-44
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 165 6e-40
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 155 4e-37
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 146 2e-34
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 144 7e-34
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 91 1e-17
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 89 5e-17
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 88 8e-17
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 47 2e-08
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 58 1e-07
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 50 2e-05
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 44 0.002
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 44 0.002
UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.007
UniRef50_A7QSF2 Cluster: Chromosome chr12 scaffold_159, whole ge... 39 0.049
UniRef50_A7DKP6 Cluster: UreE urease accessory domain protein; n... 38 0.11
UniRef50_A4S810 Cluster: Predicted protein; n=1; Ostreococcus lu... 36 0.35
UniRef50_O59441 Cluster: 50S ribosomal protein L15P; n=7; Euryar... 35 0.80
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 33 4.3
UniRef50_Q8JJW3 Cluster: Putative movement protein; n=1; Sweet p... 32 7.4
UniRef50_Q1IH54 Cluster: CDS19; n=1; Mycoplasma agalactiae|Rep: ... 32 7.4
UniRef50_A7CFA3 Cluster: Putative uncharacterized protein precur... 31 9.8
UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8; Burkh... 31 9.8
UniRef50_A1HMR5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.8
UniRef50_Q7S2U4 Cluster: Predicted protein; n=1; Neurospora cras... 31 9.8
UniRef50_Q6BNC8 Cluster: Debaryomyces hansenii chromosome E of s... 31 9.8
UniRef50_Q4P1J5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.8
UniRef50_Q9UX85 Cluster: 50S ribosomal protein L15P; n=4; Sulfol... 31 9.8
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 180 bits (437), Expect = 2e-44
Identities = 83/148 (56%), Positives = 99/148 (66%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 YHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXPKQ 381
YH++RN+ FCP +NLDKLWTLVSEQ R+ A G P+I++V PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 382 PVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
PVIVKAKFFS+ AE+KIK+VGG CVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 165 bits (400), Expect = 6e-40
Identities = 74/115 (64%), Positives = 87/115 (75%)
Frame = +1
Query: 121 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASA 300
NAGG+HHHRIN DKYHPGYFGK+GMRN+H+R+N +CP +NLDKLW+LVSE+ R YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 301 TDGKVPVINIVXXXXXXXXXXXXXPKQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
D K PVI++V PKQPVIVKAKFFS+TAEQKIK VGG C+L A
Sbjct: 80 KD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 155 bits (377), Expect = 4e-37
Identities = 77/150 (51%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGM 195
M + KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 196 RNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXP 375
R +H+++N CPV+N+DKLW+LVS+ R KYA KVPVI++ P
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLP 119
Query: 376 KQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
QPV+VKAK+FSKTAE++I AVGG CVL+A
Sbjct: 120 NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 146 bits (354), Expect = 2e-34
Identities = 71/155 (45%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Frame = +1
Query: 4 RGEDVNMA-TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYF 180
R D N++ T K RK RGHVS AGG+HHHRI MDKYHPGYF
Sbjct: 45 RRGDANLSRTQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYF 104
Query: 181 GKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXX 360
GK+GMR++H +N+ CP +N+DKLWTLV + R + A T + PVI++
Sbjct: 105 GKVGMRHFHKLKNQTVCPTINIDKLWTLVGTEKREECAKNT-SQAPVIDLTDHGIFKLLG 163
Query: 361 XXXXPKQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
P QPV+VK ++ SK AE+KIK VGG C+L+A
Sbjct: 164 KGQLPNQPVVVKCRYISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 144 bits (350), Expect = 7e-34
Identities = 75/149 (50%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
MAT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 202 YHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXPK- 378
+H RNK FCP++NLDKLW+LV E + K S+ D VP+I++ P+
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPEN 117
Query: 379 QPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
+P +VKAK SKTAE+KIK GG VL+A
Sbjct: 118 KPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 91.1 bits (216), Expect = 1e-17
Identities = 46/147 (31%), Positives = 76/147 (51%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M KKTRKLRGHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 202 YHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXPKQ 381
YH + N D+ ++ +LW ++ ++ R + + KVPVI++ ++
Sbjct: 61 YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDVREFGYHVVVGGKLSLER 119
Query: 382 PVIVKAKFFSKTAEQKIKAVGGVCVLS 462
P++VKA++F+ +A+++I VGG +++
Sbjct: 120 PIVVKARYFTPSAKEEITKVGGKWIIT 146
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 89.0 bits (211), Expect = 5e-17
Identities = 47/147 (31%), Positives = 73/147 (49%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 202 YHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXPKQ 381
Y + +F +NLDK+ + + L +++D ++ ++
Sbjct: 61 YRKLKQNNFNKSINLDKISDKLVKNMHLHTKNSSDS----FDLSLIGMSKVLGRGRMVQK 116
Query: 382 PVIVKAKFFSKTAEQKIKAVGGVCVLS 462
P ++KA FSK A +KIK GG C+L+
Sbjct: 117 PFVIKANSFSKVAVKKIKKAGGYCILT 143
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 88.2 bits (209), Expect = 8e-17
Identities = 47/112 (41%), Positives = 63/112 (56%)
Frame = +1
Query: 130 GEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDG 309
G ++ + YFGK+GMR++H+ RN F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 310 KVPVINIVXXXXXXXXXXXXXPKQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
+VPVI+ + P P IVKA++ S AE+KIK GGV L A
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAGGVVKLVA 187
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/50 (50%), Positives = 26/50 (52%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 171
M T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 47.2 bits (107), Expect(2) = 2e-08
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGM 195
M TS+KKTR LR HVS H R + PG G +GM
Sbjct: 1 MTTSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGM 39
Query: 196 RNYHMRRNKDFCPVLNLDKLWTLV 267
R +H RNK +C ++NLDKLW++V
Sbjct: 40 RYFHKLRNKFYCQIVNLDKLWSMV 63
Score = 33.1 bits (72), Expect(2) = 2e-08
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 379 QPVIVKAKFFSKTAEQKIKAVGGVCVLS 462
+PV+VKAK S T E+KIK G VL+
Sbjct: 73 KPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +1
Query: 157 DKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQA 279
DK+HPG FGK+GMR++H R K CP++++DKLW++V A
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMVPPAA 68
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M T KK+RK+RG S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 202 YHMRR 216
Y++ +
Sbjct: 61 YNLEK 65
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 373 PKQPVIVKAKFFSKTAEQKIKAVGGVCVLSA 465
PKQPV+VKA+ S+ AE+KI+ VGG CVL A
Sbjct: 56 PKQPVMVKAEGSSRRAEEKIEGVGGACVLVA 86
Score = 38.7 bits (86), Expect = 0.065
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 174
M+ +KTRK +GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 43.6 bits (98), Expect = 0.002
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +1
Query: 121 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASA 300
NAG + H +++ K++P YFGK G N++ C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 301 ---TDGKVPVINIVXXXXXXXXXXXXXPKQPVIVKAKFFSKTAEQKIKAVGG 447
+GKV V+N ++VKA FS+ A++KI+A GG
Sbjct: 89 FQVEEGKV-VVNATEIGFEKVLGKGRI-STAMVVKAVEFSEGAKEKIEAAGG 138
>UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 181
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -1
Query: 257 HSLSRFKTGQKSLFLLMW*FLIPSLPKYPGWYLS 156
HSLS + GQ SL +W LIP+ PK PGW LS
Sbjct: 3 HSLSTWTIGQWSLMRSLWKCLIPTFPKLPGWCLS 36
>UniRef50_A7QSF2 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 442
Score = 39.1 bits (87), Expect = 0.049
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -1
Query: 278 ACSETRVHSLSRFKTGQKSLFLLMW*FLIPSLPKYPGWYLS 156
A T HSLS + GQ SL +W LIP+ K PGW LS
Sbjct: 349 AAGGTMDHSLSMWMIGQWSLMRSLWKCLIPTFLKLPGWCLS 389
>UniRef50_A7DKP6 Cluster: UreE urease accessory domain protein; n=2;
Methylobacterium extorquens PA1|Rep: UreE urease
accessory domain protein - Methylobacterium extorquens
PA1
Length = 212
Score = 37.9 bits (84), Expect = 0.11
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 142 DGAHHQHYHVHQDAYGACRYDHDH 71
D AHH H H H A+G C +DH H
Sbjct: 171 DHAHHDHDHGHSHAHGGCGHDHSH 194
>UniRef50_A4S810 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 263
Score = 36.3 bits (80), Expect = 0.35
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 145 CDGAHHQHYHVHQDAYGACRYDHDHG 68
CDG HH H H H A G + +HDHG
Sbjct: 148 CDGTHHSHGHGHSHAEGE-KCEHDHG 172
>UniRef50_O59441 Cluster: 50S ribosomal protein L15P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Pyrococcus horikoshii
Length = 147
Score = 35.1 bits (77), Expect = 0.80
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 379 QPVIVKAKFFSKTAEQKIKAVGGVCVLS 462
+P+ +KAK FS AE+KIKA GG +L+
Sbjct: 120 RPLTIKAKAFSAKAEEKIKAAGGEVILA 147
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 32.7 bits (71), Expect = 4.3
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +1
Query: 22 MATSKKKTRKLRG-HVSXXXXXXXXXXXXXXXXXNAGGE-HHHRINMDKYHPGYFGKLGM 195
MAT +KTRKLRG G+ HH +M K PG+FG
Sbjct: 1 MATRNRKTRKLRGSRTHGWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDST 60
Query: 196 RNYHMRRNKDFCPVLNLDKLWT 261
H K + V +LD T
Sbjct: 61 HPPHSNAAKKWASVRDLDDFHT 82
>UniRef50_Q8JJW3 Cluster: Putative movement protein; n=1; Sweet
potato chlorotic stunt virus|Rep: Putative movement
protein - Sweet potato chlorotic stunt virus
Length = 518
Score = 31.9 bits (69), Expect = 7.4
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 121 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKY 291
N G + +YHPG FG + + HMR DF +LNL L+SE ++ Y
Sbjct: 440 NRGDRARAMFKICEYHPGLFGSIPRIDNHMR--FDFFKLLNL----RLMSESEKVSY 490
>UniRef50_Q1IH54 Cluster: CDS19; n=1; Mycoplasma agalactiae|Rep:
CDS19 - Mycoplasma agalactiae
Length = 1517
Score = 31.9 bits (69), Expect = 7.4
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -1
Query: 326 LITGTLPSVADAYFSLACSETRVHSLSRFKTG-----QKSLFLLMW*FLIPSLPKYPG 168
LIT L S +D+ F+ + + R + FK+G +K F W FL+P P G
Sbjct: 36 LITNKLLSGSDSNFNRSYIDNRFSQIDEFKSGVYKKREKQTFTYKWNFLLPDSPYLVG 93
>UniRef50_A7CFA3 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 489
Score = 31.5 bits (68), Expect = 9.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -2
Query: 157 PC*FC-DGAHHQ-HYHVH-QDAYGACRYDHDHG 68
PC C DG HH H+H H D G DHDHG
Sbjct: 240 PCGSCHDGGHHHGHHHDHDHDHGGHPGGDHDHG 272
>UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8;
Burkholderiales|Rep: Excinuclease ABC, A subunit -
Acidovorax sp. (strain JS42)
Length = 1029
Score = 31.5 bits (68), Expect = 9.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -2
Query: 205 GNFSYQVCQSTQGGTCPC*FCDGAHHQHYHVHQDAYGACRYDHDHGSR 62
G FS+ V Q + GG C DG H D Y C D HG R
Sbjct: 808 GRFSFNVAQGSGGGRCEACQGDGVVKVEMHFLPDVYVPC--DVCHGQR 853
>UniRef50_A1HMR5 Cluster: Putative uncharacterized protein; n=1;
Thermosinus carboxydivorans Nor1|Rep: Putative
uncharacterized protein - Thermosinus carboxydivorans
Nor1
Length = 409
Score = 31.5 bits (68), Expect = 9.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 133 HHQHYHVHQDAYGACRYDHDHG 68
HH H+H H + GA Y HDHG
Sbjct: 196 HHHHHHAHGNK-GAHAYRHDHG 216
>UniRef50_Q7S2U4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1134
Score = 31.5 bits (68), Expect = 9.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 175 TQGGTCPC*FCDGAHHQHYHVHQDAYGACRYDHDHGSRVL 56
T C C DG QH HV DAY H+H + L
Sbjct: 815 TDSCVCYCLASDGCLPQHLHVSFDAYSRICNQHEHKANAL 854
>UniRef50_Q6BNC8 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1087
Score = 31.5 bits (68), Expect = 9.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 138 PSQNQHGQVPPWVLWQTWYEKLPHEK 215
P+ + Q P W+ W T +E+ P+EK
Sbjct: 290 PNNQKSVQCPDWISWSTLFERQPYEK 315
>UniRef50_Q4P1J5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1092
Score = 31.5 bits (68), Expect = 9.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 133 HHQHYHVHQDAYGACRYDHDHG 68
HH H H H + + A +DH HG
Sbjct: 1058 HHDHGHSHSNGHSAHAHDHSHG 1079
>UniRef50_Q9UX85 Cluster: 50S ribosomal protein L15P; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L15P -
Sulfolobus solfataricus
Length = 144
Score = 31.5 bits (68), Expect = 9.8
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Frame = +1
Query: 34 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRIN-MDKYHPGYFGKLGMRNYHM 210
+KK+RK+RG + G H + + + KY G++GK G RN
Sbjct: 6 EKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGFRNPTT 65
Query: 211 RRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVXXXXXXXXXXXXXPKQPVI 390
+ ++L KL L+ E +K K+ +N + P V
Sbjct: 66 KLTS----AISLRKLNELL-ESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIP---VT 117
Query: 391 VKAKFFSKTAEQKIKAVGGVCVLS 462
+K + A QK+K +GG +LS
Sbjct: 118 IKVGKATNKAIQKVKEMGGEVILS 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,552,141
Number of Sequences: 1657284
Number of extensions: 7225562
Number of successful extensions: 20351
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 18606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20099
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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