Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H18
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07) 96 1e-20
SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05) 92 2e-19
SB_55124| Best HMM Match : FxsA (HMM E-Value=0.78) 83 7e-17
SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-15
SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 6e-12
SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13) 51 3e-07
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 51 3e-07
SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 32 0.21
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 31 0.49
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_8550| Best HMM Match : MASE1 (HMM E-Value=1.5) 29 1.1
SB_44488| Best HMM Match : PPI_Ypi1 (HMM E-Value=1.6) 29 1.5
SB_46346| Best HMM Match : 7tm_1 (HMM E-Value=7.9e-06) 29 1.5
SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14) 29 2.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 2.6
SB_46883| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 27 6.0
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 6.0
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 27 6.0
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 27 6.0
SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4) 27 6.0
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 27 6.0
SB_32040| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 27 6.0
SB_8751| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 27 6.0
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 6.0
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40) 27 7.9
SB_51925| Best HMM Match : DIX (HMM E-Value=0.75) 27 7.9
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 27 7.9
>SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 96.7 bits (230), Expect = 7e-21
Identities = 51/132 (38%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Frame = +2
Query: 11 IAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGCA 190
I + +IT Y+ +N+AY+TVL A + + AVAV+ G LGP ++IP+ VA +TFG
Sbjct: 270 IGISIITGCYLMVNIAYITVLGGAGILASEAVAVSIGDVYLGPMKWIIPVFVAASTFGTV 329
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFIT-SVFISVG-NIKTLI 364
V F R+ YTAAR G + + + + +KRLTP P++ + I + + G N +L+
Sbjct: 330 NGVAFTSGRLTYTAARDGLLPSMLAMIQVKRLTPLPSMLLTSTIAICMLLPPGSNFMSLV 389
Query: 365 EFASWYLWFFYG 400
F S+ W FYG
Sbjct: 390 GFFSFAAWLFYG 401
>SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07)
Length = 530
Score = 95.9 bits (228), Expect = 1e-20
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 11 IAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGCA 190
I + LIT Y+ +NVAY+TVL + + AVAV+ G LGP +++PL VA +TFG
Sbjct: 318 IGISLITVCYLLINVAYITVLGASGILESEAVAVSVGNMYLGPVKWIVPLFVAASTFGAV 377
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFI--SVGNIKTLI 364
+ R+ Y AAR M + + +++KR TP P++ F ++ + + + TL+
Sbjct: 378 NGMVLTNGRLLYVAARDNLMPSLLAMIHVKRFTPLPSLLFTTLVSVIMLIPETSSFTTLV 437
Query: 365 EFASWYLWFFYG 400
+F S+ W FYG
Sbjct: 438 DFFSFAAWLFYG 449
>SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05)
Length = 889
Score = 91.9 bits (218), Expect = 2e-19
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 11 IAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGCA 190
I++P++T YV +NV Y+ VLS E+ AVAV R+ G ++ +P VA + FG
Sbjct: 673 ISIPVVTLSYVLVNVGYLAVLSPVEIQESNAVAVTLAYRLYGVMAWTMPFLVACSVFGSV 732
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFI--SVGNIKTLI 364
F + R+ Y AAR+GH+ + + ++ K+ TP PA+ F AFI + + V +L+
Sbjct: 733 NGSCFALGRLTYAAARNGHLPRIMAMIHKKKRTPLPAILFSAFICVLMMIPDVSTFSSLL 792
Query: 365 EFASWYLWFFYG 400
+ S+ W YG
Sbjct: 793 NYFSFLTWVNYG 804
>SB_55124| Best HMM Match : FxsA (HMM E-Value=0.78)
Length = 311
Score = 83.4 bits (197), Expect = 7e-17
Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Frame = +2
Query: 14 AVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPA-SFLIPLGVAIATFGCA 190
++ L+ LY+ +N+AY+ VL+ E+ + PA AV+F R+ G +LIPL V+ FG
Sbjct: 10 SITLVALLYLLVNIAYLAVLTAPEVKASPATAVSFAQRMYGTGVQWLIPLCVSATVFGTM 69
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFI--SVGNIKTLI 364
+ +G+ R+ + AAR GH+ V + ++ + TP PA+ + AFI +V + ++K L+
Sbjct: 70 NARVYGLGRMYFAAAREGHLPRVLAMLHTDKRTPIPAMLYLAFIITVILIPRQTSVKMLL 129
Query: 365 EFASWYLW 388
+ + +W
Sbjct: 130 KILGFGMW 137
>SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 82.6 bits (195), Expect = 1e-16
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 11 IAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASF-LIPLGVAIATFGC 187
IA+PL+T Y+ +N+AY+ +LS AE+ S AVAV F +V P LIP+ V+ + FG
Sbjct: 245 IALPLVTICYILINMAYLCILSPAEIISSEAVAVTFADKVNHPIIMALIPILVSCSCFGA 304
Query: 188 AMSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGNIKTLIE 367
A S F +V A + GHM VN + P AVA +FI + + N+ +LI
Sbjct: 305 ANSSIFTNAKVVCAAVKQGHMPLFLGAVNKRLQMPIYAVASPSFIGLLLLIPSNLGSLIS 364
Query: 368 FASWYLWFFYGLAMV 412
S+ W YG A +
Sbjct: 365 CFSFVAWGLYGGAFL 379
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 78.2 bits (184), Expect = 2e-15
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 14 AVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPA-SFLIPLGVAIATFGCA 190
++ +T LY+ +N+AY+ VL+ E+ + PA AV+F R+ G +LIPL V+ FG
Sbjct: 372 SITFVTLLYLLVNIAYLAVLTVPEVKASPATAVSFAQRMYGTGVQWLIPLCVSATVFGTM 431
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFI 337
+ +G+ R+ + AAR GH+ + ++ + TP PA+ + AFI + +
Sbjct: 432 NARVYGMGRMYFAAAREGHLPRALAMLHTDKRTPIPAMLYLAFIITAIL 480
>SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 66.9 bits (156), Expect = 6e-12
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +2
Query: 119 GARVLGPASFLIPLGVAIATFGCAMSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAP 298
G LGP S++IP+ VA +TFGC + F R+ Y +AR+GHM + + ++ K TP P
Sbjct: 248 GDMYLGPMSWIIPIFVACSTFGCVNGLLFSGARLVYVSARNGHMPRLLAMIHNKCQTPMP 307
Query: 299 AVAFQAFITSVFI--SVGNIKTLIEFASWYLWFFY 397
++ F I + + TL+ + S+ W Y
Sbjct: 308 SIIFMNTIALIMLIPDASEFGTLVNYFSFAAWLSY 342
>SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13)
Length = 446
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +2
Query: 5 EAIAVPLITSLYVFMNVAYMT--VLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIAT 178
++I + L S + VA + ++ Y ++ +A AF +R A ++I +G AT
Sbjct: 262 QSIILSLAVSFLAYFGVATILTLIIPYQNLSHFAPLAEAFVSRGFPAAKYVISVGALCAT 321
Query: 179 FGCAMSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGNIKT 358
C M F RV Y+ A G + F++VN + P A + + +I+
Sbjct: 322 SCCLMCNSFAAPRVVYSMASDGLLFRFFAHVNDRTHVPVRAALADYVVIGTLAVLLDIRQ 381
Query: 359 LIEFAS 376
L+E S
Sbjct: 382 LVEMLS 387
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +2
Query: 5 EAIAVPLITSLYVFMNVAYMT--VLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIAT 178
++I + L S + VA + ++ Y ++ +A AF +R A ++I +G AT
Sbjct: 544 QSIILSLAVSFLAYFGVATILTLIIPYQNLSHFAPLAEAFVSRGFPAAKYVISVGALCAT 603
Query: 179 FGCAMSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGNIKT 358
C M F RV Y+ A G + F++VN + P A + + +I+
Sbjct: 604 SCCLMCNSFAAPRVVYSMASDGLLFRFFAHVNDRTHVPVRAALADYVVIGTLAVLLDIRQ 663
Query: 359 LIEFAS 376
L+E S
Sbjct: 664 LVEMLS 669
>SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 8 AIAVPLITSLYVFMNV-AYMT-VLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATF 181
AI + L+T ++ V A +T ++ Y ++ A+ AF R A ++I +G
Sbjct: 727 AIVISLLTCFCAYLGVSATVTLIIPYNQLDYGAALPKAFARRGAYFAQYVIAIGALCGMT 786
Query: 182 GCAMSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGNIKTL 361
F + R+ Y + G + ++FSYV+ + P F + + + ++ L
Sbjct: 787 AAINGGLFPLPRLLYAMSSDGLIFKMFSYVSKRTEVPIAGTVFSGVLAGLLAMLFELQEL 846
Query: 362 IEFAS 376
+E S
Sbjct: 847 VEMMS 851
>SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 215 RVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGN 349
R+ Y AAR GH+ E + V+ KR TP PA+ F F S +SV N
Sbjct: 617 RLVYVAAREGHLPEFLAMVHTKRHTPLPAMLFN-FWKSDRLSVSN 660
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 31.9 bits (69), Expect = 0.21
Identities = 23/107 (21%), Positives = 37/107 (34%)
Frame = -1
Query: 325 SYESLESDSRSWSQSFYVNI*EHFKHVSAPRGCVAHSCNTELHAHGAPEGSDGNTERYEE 146
+Y DS ++ + Y + + V C ++ H+H S N E
Sbjct: 273 TYSGTAGDSLAYHRGGYFSTPDRDNDVKDSESCADGHGHSHGHSHENHGHSHENHGHSHE 332
Query: 145 ARGAEHPGSEGDRHSRHGGHLRVTQYSHIGHIHEHIEARDERNRDRL 5
G H + G H HG +SH H H H + + + L
Sbjct: 333 NHGHSHE-NHGHSHKHHGHSHDNHGHSHENHGHSHGHSHEHEPKQDL 378
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 30.7 bits (66), Expect = 0.49
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Frame = -1
Query: 178 GSDGNTERYEEARGAEHPGSEGD---------RHSRHGGHLRVTQYSHIGHIHEHIEARD 26
G+ + E E+ AE PGS+ D RH RH R H H EH R
Sbjct: 803 GNTNDEEELEDMSMAEKPGSQSDNELNRPPQDRHRRHHHRRRHHNNKHRKHSREHSRRRH 862
Query: 25 ERNRDR 8
+R +
Sbjct: 863 QRKHHK 868
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 270 TYENTSSMCPLRAAV*HTLVTPNCTLMAHPKVAMATPSGMRKLAGP-STRAPKATATAGT 94
T S++ P AA + +TP T++ A T P +T +P++T GT
Sbjct: 872 TVSPESTVAPGIAAASESSITPGTTVLPESTAAPLTTGASESTVAPGTTLSPESTVAPGT 931
Query: 93 EVIS 82
V S
Sbjct: 932 TVAS 935
>SB_8550| Best HMM Match : MASE1 (HMM E-Value=1.5)
Length = 317
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 8 AIAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGC 187
AIAV + ++ V + +A ++ A +V AVAVA V G + I + +AIA
Sbjct: 44 AIAVAVAVAVAVAVAIAIAIAIAVAVAVAV-AVAVAVAVAVAGAVAIAITVAIAIAV-AV 101
Query: 188 AMSVQFGVT 214
A +V VT
Sbjct: 102 AGAVAVAVT 110
>SB_44488| Best HMM Match : PPI_Ypi1 (HMM E-Value=1.6)
Length = 194
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = -2
Query: 303 TAGAGVSLFMLTYENTSSMCPLRAAV*H----TLVTPNCTLMAHPKVAMATPSGMRKLAG 136
TAG V + T CP A T VTP+ T+ +HP+ A +R + G
Sbjct: 130 TAGVAVGFSVTTAPTNQQSCPCLATTNQCACATRVTPSSTICSHPRRKTARNDTLRDIWG 189
>SB_46346| Best HMM Match : 7tm_1 (HMM E-Value=7.9e-06)
Length = 294
Score = 29.1 bits (62), Expect = 1.5
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +2
Query: 23 LITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATF-GCAMSV 199
L+ +YV VA + + AEM+ + V A + SFL + + F + +
Sbjct: 74 LVQPMYVIYKVAELYEM--AEMSCITGVITNILANIASGMSFLTMNLITVDRFFALHLHL 131
Query: 200 QFG--VTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITSVFISVGNI 352
++ VTR Y G + VF + + +V F AF+ ++ + + +
Sbjct: 132 RYKGIVTRGLYVKVTLGTLAIVFLFASFYPWKVNVSVVFNAFVVAICLIISTV 184
>SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14)
Length = 908
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 372 ANSIRVLMLPTEMKTEVMKAWKATAGAGVSLFMLTYENTSSM 247
A+ I L+ P E+ W ATAG GVSL T+ S+
Sbjct: 610 ASDITPLLTPLEIHQLNFAVWCATAGCGVSLTDPTFATLPSV 651
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -2
Query: 255 SSMCPLRAAV*HTLVTPNCTLMAHPKVAMATPSGMRKLAGPSTR-APKATATAGTEVIS 82
+SM P A T P TL+ A AT + A P T AP+ T T + S
Sbjct: 671 TSMAPETTAAPETTAAPETTLLPETTSAPATTMPPEQTAAPETTVAPETTDAPATTLAS 729
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = -2
Query: 255 SSMCPLRAAV*HTLVTPNCTLMAHPKVAMATPSGMRKLAGPSTRAPKATATA--GTEVIS 82
++M P A T V P TL T A P T A AT A TE I
Sbjct: 575 TTMAPETTAARETTVAPETTLAPKTTATPETTLASETTASPETTAAPATTMAPETTEAIE 634
Query: 81 A*LST 67
++T
Sbjct: 635 TTMAT 639
>SB_46883| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 370
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 51 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 97
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 98 TTTFCNCKSERKH 110
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 193 HGAPEGSDGNTERYEEARGAEHPGSEGDR 107
HG P+G G ++ + RG + G G R
Sbjct: 305 HGPPDGPHGQRMQHHDIRGPDPRGDRGPR 333
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 440 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 486
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 487 TTTFCNCKSERKH 499
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 10 DRGSSHHEPLCVHECGLYDCTELRG 84
D + H + LC + G Y+CT LRG
Sbjct: 1045 DLDNCHADALCTNTKGSYNCTCLRG 1069
>SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4)
Length = 339
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = -1
Query: 205 ELHAHGAPEGSDGNT----ERYEEARGAE-HPGSEGDRHSRHGGHLRVTQYSHIGHIHEH 41
ELH H + +T +++ E++ E PGS RH G R SH H H
Sbjct: 142 ELHLHHPRDHDRKDTGSHRQQHSESKRVETFPGSS--RHEHSGSRKREHMESHRHSKHSH 199
Query: 40 IEARDER 20
+ +D+R
Sbjct: 200 GQDKDQR 206
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 10 DRGSSHHEPLCVHECGLYDCTELRG 84
D + H + LC + G Y+CT LRG
Sbjct: 459 DLDNCHADALCTNTKGSYNCTCLRG 483
>SB_32040| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 471
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 276 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 322
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 323 TTTFCNCKSERKH 335
>SB_8751| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 637
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 345 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 391
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 392 TTTFCNCKSERKH 404
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 234 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 280
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 281 TTTFCNCKSERKH 293
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 PLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARCCHRYLRVRHERAVRCY 213
P C E L DC +G DL GR R L R CH LR H R RC+
Sbjct: 512 PCCQGEHRLSDCANFKGRDL----PGRWR--------LVKEKRLCHICLRPGHMRD-RCH 558
Query: 214 KSVL-HSRAERTH 249
+ + ++ER H
Sbjct: 559 TTTFCNCKSERKH 571
>SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 1 ARGDRGSSHHEPLCVHECGLYDCT 72
+R +R +SH+ C+H C + D T
Sbjct: 696 SRRNRSNSHNSDSCLHNCTIEDTT 719
>SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40)
Length = 644
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 13 RGSSHHEPLCVHECGLYDCTELRGDDLRAGCGGRLRSPGARPRELPHTARC 165
RG+ +C +C + ++G GRLRSPG PR P C
Sbjct: 316 RGTCRATTTDTRKCNTGECPPACSET-QSGTSGRLRSPG-YPRPYPPNQDC 364
>SB_51925| Best HMM Match : DIX (HMM E-Value=0.75)
Length = 256
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 406 CEAVEEPQVPTREFY*SLNVANRDEDRSYESLESDSRSWSQSFYVNI 266
CE +EE + + LN A E L +R W QS NI
Sbjct: 12 CERLEEMKAEEERLHEKLNSAKEQRTSDLEILSVINRHWIQSNIRNI 58
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 250 HVSAPRGCVAHSCNTELHA 194
H S PRG +C+TEL+A
Sbjct: 422 HCSCPRGYTGKTCDTELNA 440
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,597,149
Number of Sequences: 59808
Number of extensions: 270273
Number of successful extensions: 1047
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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