Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H18
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17120.1 68414.m02086 amino acid permease family protein low ... 39 0.002
At3g03720.1 68416.m00377 amino acid permease family protein simi... 33 0.075
At2g04620.1 68415.m00470 cation efflux family protein potential ... 30 0.53
At3g63100.1 68416.m07087 glycine-rich protein 29 0.92
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 29 1.6
At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2 (PL... 28 2.1
At1g32150.1 68414.m03955 bZIP transcription factor family protei... 28 2.1
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 2.8
At2g35530.1 68415.m04352 bZIP transcription factor family protei... 27 3.7
At5g46730.1 68418.m05757 glycine-rich protein 27 4.9
At5g45380.1 68418.m05577 sodium:solute symporter family protein ... 27 4.9
At1g54360.2 68414.m06198 expressed protein 27 4.9
At1g54360.1 68414.m06197 expressed protein 27 4.9
At5g19010.1 68418.m02258 mitogen-activated protein kinase, putat... 27 6.5
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 26 8.6
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 26 8.6
At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)... 26 8.6
At1g09780.1 68414.m01097 2,3-biphosphoglycerate-independent phos... 26 8.6
>At1g17120.1 68414.m02086 amino acid permease family protein low
similarity to SP|O43246 Cationic amino acid
transporter-4 (CAT-4) {Homo sapiens}; contains Pfam
profile PF00324: Amino acid permease
Length = 590
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Frame = +2
Query: 14 AVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGCAM 193
++ +IT +Y M +A ++ Y E+ + A +VAF + A +L+ + +
Sbjct: 316 SMSMITVVYCLMALALTMMVKYTEIDANAAYSVAFAQIGMKWAKYLVGICALKGMTTSLL 375
Query: 194 SVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPA---VAFQAFITSVFISVGNIKTLI 364
G R ARS + F+ V+ K TP A V + I S F S+ + ++
Sbjct: 376 VGSLGQARYTTQIARSHMIPPWFALVHPKTGTPIYATLLVTILSSIISFFTSLEVLSSVF 435
Query: 365 EFASWYLWFFYGLAMV 412
FA+ +++ +A++
Sbjct: 436 SFATLFIFMLVAVALL 451
>At3g03720.1 68416.m00377 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 600
Score = 33.1 bits (72), Expect = 0.075
Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 11 IAVPLITSLYVFMNVAYMTVLSYAEMTSVPAVAVAFGARVLGPASFLIPLGVAIATFGCA 190
IA+ + LY+ ++V + ++ Y + ++ AFG + A++++ G A
Sbjct: 265 IALLICCILYMLLSVVIVGLVPYYSLNPDTPISSAFGDSGMQWAAYILTTGAITALCASL 324
Query: 191 MSVQFGVTRVCYTAARSGHMLEVFSYVNIKRLTPAP---AVAFQAFITSVFISVGNIKTL 361
+ R+ AR G + FS ++ + P A+ A + F+ V + +
Sbjct: 325 LGSLLAQPRIFMAMARDGLLPAFFSEISPRTQVPVKSTIAIGVLAAALAFFMDVAQLSEM 384
Query: 362 I 364
+
Sbjct: 385 V 385
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.3 bits (65), Expect = 0.53
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = -1
Query: 223 AHSCNTELHAHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRHGGHLRVTQYSHIGHIHE 44
AH + H+H S N E ++ + +H E +HS H ++ H H H
Sbjct: 548 AHGGSGCTHSHSHQSHSHKNEEHHQHSDSHKH--EEHHQHSDSHKHEEHHEHDHHHHSHS 605
Query: 43 HIEARDERNRD 11
H N D
Sbjct: 606 HKHEECNHNHD 616
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 29.5 bits (63), Expect = 0.92
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -1
Query: 235 RGCVAHSCNTELHAHGAPEGSDGNTERYEEARG-AEHPGSEGDRHSRHGGHLRVTQYSHI 59
RGC H C H +G + + G EH G H R GH + H
Sbjct: 50 RGCCRHCCGGRRHDYGRDCCHCDHCHGHGYGHGHREHGHDRGHGHGRGHGHGH--GHGHR 107
Query: 58 GHIHEHIEARD 26
H +H RD
Sbjct: 108 RHGRDHRHGRD 118
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 199 HAHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRHGGHLR--VTQYSHIGHIHEH 41
H HG G + G H G H RHG R + H GH H H
Sbjct: 75 HGHGYGHGHREHGHDRGHGHGRGHGHGHGHGHRRHGRDHRHGRDRGHHRGHGHHH 129
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia]
Length = 1423
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 188 AMSVQ--FGVTRVCYTAARSGHMLEVFSYVNIKRLTPAPAVAFQAFITS--VFISVGNIK 355
A SVQ V R + ++ M Y + P V QA + V+ +G
Sbjct: 1220 AASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEW 1279
Query: 356 TLIEFASWYLWFFYG 400
T ++F WYL+F YG
Sbjct: 1280 TAVKFF-WYLFFMYG 1293
>At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2
(PLDBETA2) / PLDdelta1 identical to SP|O23078
Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD
beta 2) (PLDdelta1) [Arabidopsis thaliana]; contains
Pfam profiles: PF00614 phospholipase D.active site
motif, PF00168 C2 domain
Length = 927
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 376 TREFY*SLNVANRDEDRSYESLESDSRSWSQSFYVNI*EHFKHV 245
T + Y S++VA R+Y S++ W Q FYV + H V
Sbjct: 159 TSDPYVSISVAGAVIGRTYVISNSENPVWQQHFYVPVAHHAAEV 202
>At1g32150.1 68414.m03955 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 389
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 223 AHSCNTELHAHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRHGG 89
A S + E + G+ +GSD N++ G+ H G +G+ S GG
Sbjct: 181 ACSKSAESGSDGSSDGSDANSQNDS---GSRHNGKDGETASESGG 222
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 376 TREFY*SLNVANRDEDRSYESLESDSRSWSQSFYVNI*EHFKHV 245
T + Y S++VA R+Y S++ W Q FYV + H V
Sbjct: 315 TSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEV 358
>At2g35530.1 68415.m04352 bZIP transcription factor family protein
contains Pfam domain PF00170: bZIP transcription factor;
similar to G-Box binding protein 2 (GI:5381313)
[Catharanthus roseus].
Length = 409
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 223 AHSCNTELHAHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRHGGHLRVTQYSHIG 56
A+S + E + G+ EGSDGN++ + G + G + + S +GG Q G
Sbjct: 177 AYSKSGESASDGSSEGSDGNSQN-DSGSGLD--GKDAEAASENGGSANGPQNGSAG 229
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 196 AHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRHGGH 86
A G G G E + G EH G G H GGH
Sbjct: 247 AAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGGH 283
>At5g45380.1 68418.m05577 sodium:solute symporter family protein
contains Pfam profile: PF00474 sodium:solute symporter
family
Length = 694
Score = 27.1 bits (57), Expect = 4.9
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 101 AVAVAFGARVLGPASFLIPLGVAIATFGCAMSVQFGVTRVCYTAARSGHMLEVFSYVNIK 280
AV A L ASFLIPLGV + T + F + V ++ VF
Sbjct: 182 AVVNALTGVNLYAASFLIPLGVVVYTLAGGLKATFLASYVHSVIVHVALVVFVFLVYTSS 241
Query: 281 RLTPAPAVAF 310
+ +P+V +
Sbjct: 242 KELGSPSVVY 251
>At1g54360.2 68414.m06198 expressed protein
Length = 447
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 165 TPSGMRKLAGPSTRAPKATATAGTEV 88
T + R PST APK +A AGT+V
Sbjct: 394 TDADARHHNSPSTIAPKTSAAAGTDV 419
>At1g54360.1 68414.m06197 expressed protein
Length = 447
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 165 TPSGMRKLAGPSTRAPKATATAGTEV 88
T + R PST APK +A AGT+V
Sbjct: 394 TDADARHHNSPSTIAPKTSAAAGTDV 419
>At5g19010.1 68418.m02258 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK16) mitogen-activated protein
kinase (MAPK)(AtMPK16), PMID:12119167; similar to
ATMPK9, Arabidopsis thaliana, EMBL:AB038694
Length = 567
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 262 EHFKHVSAPRGCVAHSCNTE-LHAHGAPEGSDGNTE---RYEEARGAE 131
E +H S PR CV +S N + + E +DG ++ R E RGA+
Sbjct: 406 ERQQHASLPRACVLYSDNNHPVAQQSSAEVTDGLSKCSIRDERPRGAD 453
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 121 SEGDRHSRHGGHLRVTQYSHIGHIHEHIEARDERNRD 11
+EG+ R H + YS H H + E++RD
Sbjct: 713 NEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRD 749
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 121 SEGDRHSRHGGHLRVTQYSHIGHIHEHIEARDERNRD 11
+EG+ R H + YS H H + E++RD
Sbjct: 713 NEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRD 749
>At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)
identical to GB:Q05196 from [Arabidopsis thaliana]
Length = 668
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 244 SAPRGCVAHSCNTELHAHGAPEGSDGNTERYEEARGAEHPGSEGDRHSRH-GGHL 83
SAP+G + N ++H AP+ S T ++ + D+H R G HL
Sbjct: 544 SAPQGIIPLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHL 598
>At1g09780.1 68414.m01097 2,3-biphosphoglycerate-independent
phosphoglycerate mutase, putative /
phosphoglyceromutase, putative strong similarity to
SP|Q42908 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase (EC 5.4.2.1)
(Phosphoglyceromutase) {Mesembryanthemum crystallinum};
contains Pfam profile PF01676: Metalloenzyme superfamily
Length = 557
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 170 IATFGCAMSVQFGVTRVCYTAARSGHMLE-VFSYVNI 277
++TF C+ +V+FG + RSG+ E + YV I
Sbjct: 350 VSTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEI 386
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,433,907
Number of Sequences: 28952
Number of extensions: 175184
Number of successful extensions: 605
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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