Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H16
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.56 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.3  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +2

Query: 344 APTSSPELGAHSRGSPQGAPRRRETSHRITREAA 445
           AP   P    H R +    PR     H +TR AA
Sbjct: 313 APRERPRATDHQRRNEPKRPRPNIDRHEVTRPAA 346


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 437 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 526
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 341 SAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP 457
           S  T+SP     S+ SP  APR   T   I   + +  P
Sbjct: 195 SRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASP 233


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 259 PTPWCSRSPSYPT 297
           PTP CS + S PT
Sbjct: 192 PTPTCSEASSSPT 204



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 140 SIRGVTPDHRSVSEGNAGE 84
           S++ +  DH + + GN+GE
Sbjct: 150 SLKQMIEDHENDTTGNSGE 168


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 23  NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGPA 124
           +F + + RLR+R G++   VV     R  SDG A
Sbjct: 6   DFDTRTVRLRNRVGKRKGNVVADILSRYPSDGEA 39


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 449 RHPEHTKGEPEPGEGSRRQHGSDLTE 526
           ++P+H    P PG G +   G D T+
Sbjct: 7   QYPQHPYAAPAPGHGLQPTMG-DYTQ 31


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 355 ACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFSALFK 233
           A +  SLA   ++ N     L ++  C T+ S P F  LFK
Sbjct: 289 ATFIQSLAPLNSAANPIIYCLFSTHFCRTLGSLPPFKWLFK 329


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 490 FARFWLSFSVFWMAV 446
           FA+FW++ ++F + V
Sbjct: 2   FAKFWVNLALFCLHV 16


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 534 APVSVRSDPC*RRLPSPGSGSPLV 463
           AP+   + P  R +PSP   SP++
Sbjct: 64  APIRPVALPPKREIPSPKRSSPIL 87


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 12  ADLATSLRTRTDSDTAMAAKCFVLFACV 95
           +DL   LR   +  +++ + C V+F C+
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 12  ADLATSLRTRTDSDTAMAAKCFVLFACV 95
           +DL   LR   +  +++ + C V+F C+
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,250
Number of Sequences: 336
Number of extensions: 2247
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)