Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H15
(490 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 29 0.38
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 27 1.1
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 27 2.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.0
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 2.7
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 26 3.5
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 3.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 3.5
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 4.6
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 4.6
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 25 4.6
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 25 4.6
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 25 4.6
SPAC17C9.08 |pnu1|nuc1, end1|endodeoxyribonuclease Pnu1|Schizosa... 25 6.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 6.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 6.1
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 8.1
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 29.1 bits (62), Expect = 0.38
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 271 VHNILDVDKDGLISFNDFVLFAERFKSLGHLDEK 372
V N+ D DK+G I F +F+ A S G L++K
Sbjct: 68 VFNVFDADKNGYIDFKEFIC-ALSVTSRGELNDK 100
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 27.5 bits (58), Expect = 1.1
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 3 TRSSNVNPHKTSMQWCGLLPEGASAAGDARISRAGRTSRQGPQAMLQQTPRPP 161
TRSS+ NP + S + S A D R+S + GP+ +LQ+ R P
Sbjct: 584 TRSSSNNPIEASRPPFSRDEQDISKANDFRVSASSAVYTVGPE-LLQRKKRDP 635
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.6 bits (56), Expect = 2.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 83 RRANLASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTP 214
RR++ + P P PS N KPI GN+ Q+P+ +P
Sbjct: 178 RRSSAGTDPFSPVSPSNP---NFLTPLKPIDGNQEWQQSPLESP 218
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 2.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 110 NEPPRPSGDATANTTAAPKPIAGNENLIQ 196
N PP P+ A NTT A P+ I+
Sbjct: 1024 NRPPAPAMQARPNTTQAAAPVTSTTTTIK 1052
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -3
Query: 401 LIISLNSFACFSSR--CPRDLN-LSAKRTKSLNEI 306
L+++LN F CF+ C RD+N + K ++ L EI
Sbjct: 729 LVLALNKFGCFAKEMVCLRDVNDWNIKLSEKLCEI 763
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 25.8 bits (54), Expect = 3.5
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +1
Query: 259 KMRTVHNILDVDKDGLISFNDFVL 330
K+ + ++ D+D DG+ F++F +
Sbjct: 41 KLEKIWDLADIDDDGMFDFDEFAI 64
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.8 bits (54), Expect = 3.5
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2
Query: 438 GIDSAPLFLPRHLNNITEFLRLLLVEMPEGFEP---LSEKDEIIERDQPVLVYIQDVV 274
GI+S + L +L + T+ L E E + L+ + RDQP +YIQDV+
Sbjct: 885 GIESGDILL--YLGSRTQREEYLYGEDWEAYHSANLLTHIGQAFSRDQPYKIYIQDVM 940
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 98 ASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNA 226
A++P P P A A TT P+A + P P P A
Sbjct: 363 AAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAA 405
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 4.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 144 QTPRPPRNRSQETRI*FRIRFGLRHRMQGI*SFRI 248
QT R RN+ +E I +IRF L Q I +F +
Sbjct: 232 QTSRYARNKQKEINILQQIRFNLERICQDIGNFDV 266
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 4.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 92 NLASWPNEPPRP-SGDATANTTAAPKPIAGNENLIQN--PIRTPTPNARDLIVQN 247
N A+ P PP+ + T NT A+P + + +QN P+ + A ++ QN
Sbjct: 247 NQAALPPIPPQALPANGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVPQN 301
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 4.6
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -3
Query: 359 CPRDLNLSAKRTKSLNEISPSLSTSRMLWTVRILRRQNSERSNP 228
C N ++ L E +P L ++M+W R + SNP
Sbjct: 214 CDNTANAKTHKSWELFENTPQLPAAKMMWYRRHYLPNEKDWSNP 257
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 417 FLPRHLNNITEFLRLLLVEMPEGFEPLSEKDE 322
F R + NI + + + V++PEGFE L ++
Sbjct: 147 FFGRKVININQMHQDMAVDVPEGFELLGSTED 178
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 4.6
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 280 ILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIKMTWEEQWGAIDPYNFVTVE 459
+LD DG I ++F +R KS+ +D+ SD W++ W + +N +
Sbjct: 223 VLDTS-DGKI-LHEFTAHKKRVKSVYPVDDYLITASSDGSVCIWDKDWNLVIEHN---IP 277
Query: 460 QVFRRTCIM 486
+ R TC++
Sbjct: 278 EGNRITCMV 286
>SPAC17C9.08 |pnu1|nuc1, end1|endodeoxyribonuclease
Pnu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.0 bits (52), Expect = 6.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 76 ADAPSGNKPHHCIEVLCGLTLLDLV 2
++ P GN+ C EV+C L + + V
Sbjct: 286 SNVPKGNRKQLCSEVVCQLNVKEFV 310
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.0 bits (52), Expect = 6.1
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 83 RRANLASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNA 226
R A ++ P P PSG A + P PI+ P+ TPT A
Sbjct: 634 RPATPSNPPRSLPPPSGQVNAPMSQTPNPISFAYQ-HGTPLATPTMRA 680
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.0 bits (52), Expect = 6.1
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 424 GAIDPYNFVTVEQV 465
GA+DPY ++T E+V
Sbjct: 761 GALDPYTYLTTEEV 774
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 24.6 bits (51), Expect = 8.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 374 CFSSRCPRDLNLSAKRTKSLNEISPSLSTSRML 276
C++ +CP D+NL AK S +SP S +R L
Sbjct: 864 CYA-QCPLDMNLDAKHCIS---VSPRRSLTRHL 892
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,593
Number of Sequences: 5004
Number of extensions: 38896
Number of successful extensions: 143
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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