Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H15
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0173 + 21502765-21504216 32 0.28
09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644... 31 0.38
05_01_0450 + 3577928-3579526,3579695-3579832 31 0.38
03_06_0301 - 32974276-32974638,32974842-32974967,32975056-329751... 31 0.50
07_03_1382 - 26170563-26170631,26171151-26171843 30 0.87
06_03_0899 - 25776159-25776797,25776898-25777806,25779425-257795... 30 0.87
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 30 0.87
03_06_0094 + 31610866-31611288 29 1.5
01_06_0369 - 28794283-28794427,28794865-28795874 29 1.5
11_05_0015 + 18403367-18403729,18404500-18404565,18405121-184052... 29 2.0
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 29 2.0
05_01_0448 + 3566151-3567380,3567877-3568188,3568318-3568455 29 2.0
03_06_0394 + 33592780-33593310,33593890-33594013,33594233-335943... 29 2.0
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 2.6
06_03_0273 + 19067566-19067791,19068661-19068938,19069434-19070210 29 2.6
04_04_0199 - 23519597-23520282,23520913-23521471 29 2.6
12_02_0364 - 18020249-18020737,18021075-18021502,18021563-180216... 28 3.5
04_03_1000 + 21604164-21605387,21605467-21605817 28 3.5
02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51... 28 4.6
07_03_0631 + 20104332-20106802,20106904-20107030,20107352-201074... 27 6.1
04_03_1035 - 21887562-21890030 27 6.1
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396... 27 6.1
08_02_0949 - 22920363-22920685,22922621-22922824,22923170-229232... 27 8.1
05_02_0049 - 6083364-6084111,6084140-6084246 27 8.1
04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949... 27 8.1
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 27 8.1
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 27 8.1
01_05_0629 + 23809899-23810720 27 8.1
>03_05_0173 + 21502765-21504216
Length = 483
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 107 PNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTS 283
P PP P G A + P N+ L+ N PTP + L+ N +TT+
Sbjct: 272 PLSPPPPCGMAKPPNSGDPLTDQNNQQLMANTHSAPTPVSTPLVASNQSESSAMTTTTT 330
>09_03_0147 +
12763526-12763815,12763938-12764067,12764185-12764435,
12764546-12764750,12764878-12764918,12765006-12765131,
12765429-12765502,12765671-12765891,12766251-12766345,
12766463-12766679,12766781-12766906,12766988-12767086,
12767171-12767380,12767496-12767606
Length = 731
Score = 31.5 bits (68), Expect = 0.38
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 388 SDIIKMTWEEQWGAIDPYNFVTVEQVFRRTCIM 486
SD + + W ++ +P NFVT+E++ ++ C++
Sbjct: 194 SDDVAIVWRDEGKDSEPLNFVTLEELRKKVCLV 226
>05_01_0450 + 3577928-3579526,3579695-3579832
Length = 578
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 280 ILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIK 402
+LD + DG +S ++F LF +R K L+ K E+ +I+K
Sbjct: 513 LLDANSDGSLSSDEFALFQKRVKLKTKLENKD-DEYKEILK 552
>03_06_0301 -
32974276-32974638,32974842-32974967,32975056-32975131,
32975935-32976130,32976666-32976759,32977773-32978195
Length = 425
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 134 DATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTS 283
+A + AP I GN +QN + P+ + +VQN V+ +P+++S
Sbjct: 159 NADVSHIGAPNSIGGNATPVQNMLSGPSGGSGSQLVQNVDVLVKQPTSSS 208
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 89 ANLASWPNEPPRPSGDATANTTAAPKPI 172
A L P PP+PSGDA N P P+
Sbjct: 180 AQLGPPPPPPPQPSGDANENPPPPPPPL 207
>06_03_0899 -
25776159-25776797,25776898-25777806,25779425-25779592,
25779703-25779890,25779993-25780137,25780566-25780775
Length = 752
Score = 30.3 bits (65), Expect = 0.87
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 256 RKMRTVHNILDVDKDGLISFNDFV--LFAERFKSLGHLDEKQAKEFSDIIKMTWEEQWGA 429
RKMR H IL + GL+ N + F ++ L ++K ++E S II T+E++
Sbjct: 177 RKMREEHKILKLMLGGLLEQNGVLKRAFLKQHNRLNDYEKKMSQERSQIID-TYEKE--- 232
Query: 430 IDPYNFVTVEQVFRRTCIMY 489
I F T ++ +R Y
Sbjct: 233 IKALQFATTAKLKQRNMEQY 252
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 83 RRANLASWPNEPPRPSGDATANTTAAPK 166
R LA P EP P+ A A T AAPK
Sbjct: 177 REERLAQGPREPAAPAAAAPAQTAAAPK 204
>03_06_0094 + 31610866-31611288
Length = 140
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 68 SVRGGRRANLASWPNEPPRPSGDATANTTAAPKPIAGNENLI 193
S GGRR A P P P D TA AAPKP + +
Sbjct: 78 SPAGGRRRRGAVAPLVFPLPEEDDTAVAAAAPKPAVARKRRV 119
>01_06_0369 - 28794283-28794427,28794865-28795874
Length = 384
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 253 RRKMRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSD 393
++KM D+D D +S +DF+++ + K +G +D+K SD
Sbjct: 318 QKKMDNEPLAADLDHDASVSKSDFLIY--KLKEIGKIDDKDIAMISD 362
>11_05_0015 +
18403367-18403729,18404500-18404565,18405121-18405234,
18406109-18406297,18406335-18406667,18406708-18406743,
18407806-18407919,18408506-18408999,18409293-18409716
Length = 710
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 113 EPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSGVVR 262
+P G + TAAP+ A N L+ N TP+ +A + N +VR
Sbjct: 585 QPISHYGSIPSGATAAPEAAATNSELVCNSGATPSASATGAAMTNLQLVR 634
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 256 RKMRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQ 375
RK+R++HN LD ++ GL+ + F + F + G+ EK+
Sbjct: 11 RKLRSLHNALDCERSGLVRY--FSTASGSFPTKGNGAEKR 48
>05_01_0448 + 3566151-3567380,3567877-3568188,3568318-3568455
Length = 559
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 280 ILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIK 402
+LD + DG +S ++F LF +R + L++K E+ +I++
Sbjct: 494 LLDDNNDGSLSSDEFALFQKRVELKAKLEDKD-DEYKEILR 533
>03_06_0394 +
33592780-33593310,33593890-33594013,33594233-33594376,
33594463-33594615,33594973-33595088,33595253-33595420,
33595514-33595744,33596229-33596378
Length = 538
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 262 MRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFS 390
++ + + D+DK+G++ + +FV + + +G+ DE K FS
Sbjct: 406 LKILMDAADIDKNGILDYQEFVAVSIHVRKIGN-DEHIQKAFS 447
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 253 RRKMRTVHNILDVDKDGLISFNDF 324
R +R V ++ D DKDG++SF +F
Sbjct: 415 RELLRKVWDLSDQDKDGMLSFREF 438
>06_03_0273 + 19067566-19067791,19068661-19068938,19069434-19070210
Length = 426
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 322 FVLFAERFKSLGHLDEKQAKEFSDIIKMTWEEQWGAIDPYNFVTVEQVFRRTCIMY 489
F++ AE F+ + + + DI+ W QW + D Y ++ Q F +T + +
Sbjct: 202 FLVEAEIFEDDDGVSTSELQLHLDILDSNWTRQWNSFD-YVVISTGQWFPKTAVYW 256
>04_04_0199 - 23519597-23520282,23520913-23521471
Length = 414
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 345 EPLSEKDEIIERDQPVLVYIQDVVDGSHLTTP 250
+ L E I VL +Q+++DG H+ TP
Sbjct: 233 QKLEEASNTIREKNSVLSQLQELIDGMHIATP 264
>12_02_0364 -
18020249-18020737,18021075-18021502,18021563-18021649,
18022059-18022192,18023051-18023053,18023129-18023187,
18023429-18023887
Length = 552
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 116 PPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTSWM 289
PP P G +T + TA P P AG P R R + + + R P +W+
Sbjct: 23 PPTPRGMSTPDGTATPPPAAGRG--AATPARRVVEGLRGYLEEVGHLTRLNPQ-DAWL 77
>04_03_1000 + 21604164-21605387,21605467-21605817
Length = 524
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 71 VRGGRRANLASWPNEPPRPSGDATANT-TAAPKPIAGNENLIQNPIRTPTPNARDLI 238
VR GRR + + E P GDA T P + G E + + R +A D +
Sbjct: 36 VREGRRVVIVEYEREHPLYPGDAVKETHVLPPDSLDGGEGRLTDKARGAVSDAADRV 92
>02_01_0073 -
509377-509425,510200-510270,510420-510539,510684-510769,
510843-510915,510996-511718,513752-514081,514124-514210,
514494-515250,515336-515399,515477-515609,515702-515801,
515952-516088,516195-516341,516428-516478,517083-517148
Length = 997
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 72 SAAGDARISRAGRTSRQGPQAMLQQTPRPPR 164
+ AG + SR R R+GP A T PPR
Sbjct: 41 NGAGQTQASRTARKRRKGPVADPSSTELPPR 71
>07_03_0631 + 20104332-20106802,20106904-20107030,20107352-20107479,
20108771-20109083
Length = 1012
Score = 27.5 bits (58), Expect = 6.1
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 453 CYEVVGIDSAPLFLPRHLNNITEFLRLLLV--EMPEGFEPLSEKDEIIERDQPVLVYIQD 280
C +V + + LP HL TEFLR L+V E +GF+ + D P+
Sbjct: 844 CLKVHDCLAIMIDLPNHLLASTEFLRQLVVYEECKKGFKAI---------DYPLGFIFTP 894
Query: 279 VVDGSHLTTPE 247
G HLT P+
Sbjct: 895 TSSGPHLTHPK 905
>04_03_1035 - 21887562-21890030
Length = 822
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 9 SSNVNPHKTSMQWCGLLPEGASAAGDARISRAGRTSR 119
+S+ NP K + CGL+P AA RIS A ++R
Sbjct: 38 NSSSNPSKQHLA-CGLVPAAGGAAAGYRISCASVSNR 73
>02_05_0246 +
27136590-27138610,27138933-27139056,27139401-27139694,
27139776-27139978,27140307-27140589
Length = 974
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 77 GGRRANLA-SWPNE-PPRPSGDATANTTAAPKP 169
GGRRA A S+ N PPRPS ++ + +P+P
Sbjct: 136 GGRRACEAFSFKNRAPPRPSSSQASSPSLSPQP 168
>08_02_0949 -
22920363-22920685,22922621-22922824,22923170-22923263,
22923376-22923470,22923612-22923783
Length = 295
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 116 PPRPSGDATAN-----TTAAPKPIAGNENLIQNPIRTPTPNARD 232
P P G+ TA+ TTAAP P++G + P P+ D
Sbjct: 184 PATPEGNETASSKRSRTTAAPPPLSGAGTSVVYPFAVVKPSGLD 227
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 80 GRRANLASWPNEPPRPSGDATANT--TAAPKPIAGNENLIQNPIRTPT-PNARDLI 238
GR + +SW + PP P+ +T +T TA P ++ N +PT P+ D I
Sbjct: 58 GRCWSSSSWRSSPPSPAARSTCSTARTAPASPSRPSKLTALNLSSSPTSPSLTDSI 113
>04_04_1237 -
31991817-31992569,31993452-31993550,31994343-31994976,
31995329-31995585
Length = 580
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 72 SAAGDARISRAGRTSRQGPQAMLQQTPRPPRNR 170
SAA A + G+ RQGP+ + +Q P PP R
Sbjct: 415 SAAAAAAGEQEGKV-RQGPRGVQEQVPCPPPRR 446
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 107 PNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTP 220
P+ PP P DA A AAP P + NP +P P
Sbjct: 72 PSPPPPPPLDADAAAEAAPSPALTSPP--PNPSSSPLP 107
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 116 PPRPSGDATANTTAAPKPIAGNE 184
PPRP G A+ T A P P + E
Sbjct: 292 PPRPQGTASNTTAAMPSPPSAPE 314
>01_05_0629 + 23809899-23810720
Length = 273
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Frame = +3
Query: 69 ASAAG--DARISRAGRTSRQGPQAMLQ------QTPRPPRNRSQETRI*FRIRFG 209
AS+AG DA R GR SR P + L Q+P PR+R TR + R G
Sbjct: 198 ASSAGRFDAMRCREGRGSRSPPSSNLHPAAAQHQSPATPRHRLSATRRAAKRRLG 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,588
Number of Sequences: 37544
Number of extensions: 310060
Number of successful extensions: 1389
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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