Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H15
(490 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 36 0.018
SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 30 1.2
SB_26865| Best HMM Match : efhand (HMM E-Value=7.5e-08) 30 1.2
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 29 1.6
SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34) 29 1.6
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 29 2.1
SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_48639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 29 2.7
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 28 3.6
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078) 28 3.6
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_31416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 27 6.3
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 27 6.3
SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34) 27 8.3
SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33) 27 8.3
SB_48017| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-05) 27 8.3
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 27 8.3
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 27 8.3
SB_14758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_6281| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_37381| Best HMM Match : Ribosomal_S12 (HMM E-Value=0) 27 8.3
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 35.9 bits (79), Expect = 0.018
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 71 VRGGRRANLASWPNEPPRPSGDATANTTAAPKPIAGN-ENLIQNPIRTPTPNARDL 235
V+ N S P++PP PS D T TT P P G NP TP+PN DL
Sbjct: 611 VQAAEAENNRSNPSQPP-PSQDQTTTTTGNPSPPQGQPATTTGNP--TPSPNHNDL 663
>SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 101 SWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDL 235
S P + SG +T N + A AGN + + P R P P+AR L
Sbjct: 332 SSPASGAQTSGSSTRNASTAVTASAGNNSPLAPPSRPPPPSARPL 376
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 31.1 bits (67), Expect = 0.51
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 77 GGRRANLASWPNEPPRPSG-DATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSG 253
G + + AS P PPRP+G ANT + +N P T P +D +
Sbjct: 622 GEKDDSKASRPELPPRPTGLKKPANTGRVSNDVGLTKNAPNKPKSTTLPRRQD--SDPTV 679
Query: 254 VVRCEPSTT 280
V C+PS T
Sbjct: 680 KVSCKPSPT 688
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 253 RRKMRTVHNILDVDKDGLISFNDF-----VLFAERFKSLGHLDEKQAKEFSDIIKMTWEE 417
+ ++ TV ++LDVD G I F++F +L A + K H + ++ D++ E+
Sbjct: 1422 KSEIYTVFDMLDVDCSGSIDFDEFYLLFCILIAVKDKEEKHFIHRHSRTVFDLLD---ED 1478
Query: 418 QWGAIDPYNF 447
G I Y F
Sbjct: 1479 DSGNISAYEF 1488
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 226 KGFDRSEFWRRKMRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKE 384
K + F R RTV ++LD D G IS +F ERF L +L+ K +E
Sbjct: 1456 KDKEEKHFIHRHSRTVFDLLDEDDSGNISAYEF----ERFGFLFNLEGKAIRE 1504
>SB_26865| Best HMM Match : efhand (HMM E-Value=7.5e-08)
Length = 151
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 253 RRKMRTVHNILDVDKDGLISFNDF-----VLFAERFKSLGHLDEKQAKEFSDIIKMTWEE 417
+ ++ TV ++LDVD G I F++F +L A + K H + ++ D++ E+
Sbjct: 39 KSEIYTVFDMLDVDCSGSIDFDEFYLLFCILIAVKDKEEKHFIHRHSRTVFDLLD---ED 95
Query: 418 QWGAIDPYNF 447
G I Y F
Sbjct: 96 DSGNISAYEF 105
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 226 KGFDRSEFWRRKMRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKE 384
K + F R RTV ++LD D G IS +F ERF L +L+ K +E
Sbjct: 73 KDKEEKHFIHRHSRTVFDLLDEDDSGNISAYEF----ERFGFLFNLEGKAIRE 121
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 9 SSNVNPHKTSMQWCGLLPE--GASAAGDARISRAGRTSRQGPQAMLQQTPRPPRNRS 173
S+N P K + W LPE G S R+ R G QA+ P PPRN +
Sbjct: 192 STNHAPEKVA--WMETLPELLGQSGVSPTLSDRSPWEVRHGGQAVGTDKPSPPRNEA 246
>SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34)
Length = 674
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 107 PNEPPRPSGDATANTTAAPKP 169
P EPPRPS ATA+ P+P
Sbjct: 261 PAEPPRPSPAATAHPVMPPRP 281
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 92 NLASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNA 226
N +S P+ P P+ + ++ +P PI+ N ++ +PI P P++
Sbjct: 502 NPSSNPSSDPSPNPSSNPSSEPSPNPIS-NPSISTSPISNPHPSS 545
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 107 PNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPN 223
PN P PS D + N ++ P + N NP P+PN
Sbjct: 489 PNPSPNPSSDPSPNPSSNPSS-DPSPNPSSNPSSEPSPN 526
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 280 ILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIKMTWE-EQWGAIDPYNFVTV 456
+LD DKDG ISF ++ G ++ K D + ++ G+++ NF+TV
Sbjct: 208 MLDSDKDGKISFAEYA----GLDGTGEDNQDSLKSLKDDFNNDLDKDKDGSLNKDNFLTV 263
Query: 457 EQVFRR 474
+++ R
Sbjct: 264 DEIMER 269
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 244 EFWRRKMRTVHNILDVDKDGLISFNDFVLF 333
E+ + + ++D KDGLISF++FV F
Sbjct: 726 EYNETTLELLAGVVDQTKDGLISFSEFVAF 755
>SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 244 LNDQIPCIRCRSPNRILNQILVSCDRFRGGRGVCC 140
LN + P RC+SP R ++ + C F GG VCC
Sbjct: 595 LNSEAPEFRCQSPARNVSSSVELCS-FVGG-AVCC 627
>SB_48639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 226 KGFDRSEFWRRKMRTVHNILDVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDII 399
+ F+ EF + R I D LISF DF+ F + E A +FSD++
Sbjct: 55 QSFNMEEFMKNLQRRPEQIDGDIYDILISFTDFLAFKQTMLDYKAEKEGTAIDFSDLM 112
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 192 IRFSFPAIXXXXXXXXXXASPEGLGGSFGQLARFARRPP 76
I + FPAI P +G S G L R+ RPP
Sbjct: 443 INYVFPAINIAVLSLLVFLIPPEVGKSMGPLVRYPYRPP 481
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Frame = +2
Query: 29 QNLDAMVRFVT*RSVRGGRRANLA-SWPNEPPRPSGDAT----ANTTAAPKPIAGNENLI 193
Q L F S R ++ A S+ N PP T N+T P +AG +
Sbjct: 340 QGLQQQATFQYGYSQRNSQQGGFAYSYLNAPPPAYSPRTYITQMNSTPPPNTVAGQTSAY 399
Query: 194 QNPIRTPTPNARDLIVQNSGVVRCEPSTTS 283
Q PT + L S VV+ P+ S
Sbjct: 400 QLTSLVPTQGTQVLSDAGSNVVQYSPTMAS 429
>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
Length = 788
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 286 DVDKDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIKMTWEEQWGAID 435
DVD+D I+ + ++FAER K L L++ +E + + + + G ID
Sbjct: 472 DVDRDFQITKKEIMIFAERVKYLA-LEDNDIEEMIENLDLKELKDDGVID 520
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 77 GGRRANLASWPNEPPRPSGDATANTTAAPKPIAGNENLIQNPI-RTPTPNA 226
GGR SWP +P + + P P A E+ +P RT NA
Sbjct: 88 GGRYPLRVSWPANKNKPQPSGFSQEQSRPSPFASQEHNQTSPFARTMDDNA 138
>SB_31416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 80 GRRANLASWPNEPP--RPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSG 253
GR LA W PP + +G T++ +PI ++ N + R + V NSG
Sbjct: 109 GRSRVLAFWRAVPPSNQYTGLGDVVTSSYEQPIRSRYCVVHNSVVLTARRGRRVWVDNSG 168
Query: 254 VV 259
VV
Sbjct: 169 VV 170
>SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 972
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 51 GLLPEGASAAGDARISRAGRTSRQGPQAMLQQTPRPPRNRSQ 176
G+ GASA+G + + P ++QQ RPP N+ Q
Sbjct: 492 GVAVSGASASGQMMMQSPYMGTSPQPVYVMQQQARPPFNQPQ 533
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 459 FDCYEVVGIDSAPLFLPRHLNNITEFLRL--LLVEMPEGFEPLSEKDEIIERDQPVLVYI 286
F CY V+ + F R++N I +FL+L + + +SE +++ R +PV+ +
Sbjct: 762 FSCYWVILLSLDFSFYDRYVNMILDFLQLSNSCINIVVYAWRMSEFKQVLFRHKPVVANV 821
Query: 285 Q 283
Q
Sbjct: 822 Q 822
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 65 RSVRGGRRANLASWPNEPPRPSGDATANTTAAPKPIAG 178
+ VRGGRR N S N+ P G+ + KP G
Sbjct: 403 KKVRGGRRKNSPSLMNDDDPPYGEPISPKLKGVKPERG 440
>SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34)
Length = 411
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 167 PIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTSW 286
P E+ + P+RT T ARD+ + + ++ PST+ W
Sbjct: 348 PCRTTEHGHEGPLRTTTGTARDIEDRQTSPIQ-RPSTSGW 386
>SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33)
Length = 418
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 167 PIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTSW 286
P E+ + P+RT T ARD+ + + ++ PST+ W
Sbjct: 350 PCRTTEHGHEGPLRTTTGTARDIEDRQTSPIQ-RPSTSGW 388
>SB_48017| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-05)
Length = 249
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 45 WCGLLPEGASAAGDARISRAGRTSRQGPQAMLQQTPRPPRNRSQETRI 188
WC L + A D+RIS GRT P + +P + ++ET++
Sbjct: 200 WCRLSRGSSVGALDSRISTRGRT----PLLAVASATQPNADHAEETQV 243
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 26 TQNLDAMVRFVT*RSVRGGRRANLASWPNEPPRPSGDATANTTAAPKP 169
T + D R + +++ P PP+ S D T T+ APKP
Sbjct: 87 TVDSDLRARAIAMEALKAANAQAKEPVPYPPPQSSTDFTFKTSGAPKP 134
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +2
Query: 107 PNEPPRPSGDATANTTAAPKPIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTSW 286
P+ P + ++TT P+ + + TP + R ++ NSG+ + PS S
Sbjct: 265 PDVTQDPVTFSASSTTQGPEAVNFESSPRDISCETPGNHVRPALIGNSGLSKAGPSNCS- 323
Query: 287 M*TRTG*SRSMISSFSLRGSNPSGIST 367
S S +S+ SL S S I++
Sbjct: 324 --CDMNASPSALSASSLPASASSAIAS 348
>SB_14758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 167 PIAGNENLIQNPIRTPTPNARDLIVQNSGVVRCEPSTTSW 286
P E+ + P+RT T ARD+ + + ++ PST+ W
Sbjct: 54 PCRTTEHGHEGPLRTTTGTARDIEDRQTSPIQ-RPSTSGW 92
>SB_6281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 63 EGAS-AAGDARISRAGRTSRQGPQAMLQQTPRPPRNRSQETR 185
+GA +A AR+ + + P+ Q TPRPP +R Q +
Sbjct: 85 DGADVSARRARMMQRQNATTVDPEERQQYTPRPPSSRPQSAK 126
>SB_37381| Best HMM Match : Ribosomal_S12 (HMM E-Value=0)
Length = 413
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 45 WCGLLPEGASAAGDARISRAGRTSRQGPQAMLQQTPRPPRNRSQETRI 188
WC L + A D+RIS GRT P + +P + ++ET++
Sbjct: 364 WCRLSRGSSVGALDSRISTRGRT----PLLAVASATQPNADHAEETQV 407
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,604,288
Number of Sequences: 59808
Number of extensions: 325340
Number of successful extensions: 1334
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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