Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H14
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory
          receptor candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 90 LLVQACLDFL 61
          L+VQ CLDFL
Sbjct: 64 LIVQTCLDFL 73


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 227 DGVRNTPCPRCACIFKFRD 171
           DG+ N  C    C+F  RD
Sbjct: 540 DGICNEDCNNPECLFDGRD 558


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 74  VWIFCDKVIIPFIKIRIRW 18
           VW+   +VI+  + +++RW
Sbjct: 762 VWLKFLRVILSVVGVKLRW 780


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 24  NSNFYKRNYHFVTKNPNMPELTELDKATAS 113
           N    KR      KNPN+  +  +  ATAS
Sbjct: 78  NQGGLKRVSALKEKNPNLKVMLSVGGATAS 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,840
Number of Sequences: 336
Number of extensions: 2476
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)