Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H13
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   3.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    19   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -1

Query: 185 LPLAV-LTHHLSFGVYHGGE 129
           +PL V LTH + F + H GE
Sbjct: 450 IPLVVVLTHLIPFMLIHQGE 469


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 226 YGSFNCILYDHQHVVAEPLN 285
           Y S N  +Y HQ  VA P N
Sbjct: 5   YNSTN--MYRHQQAVAAPAN 22


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 226 YGSFNCILYDHQHVVAEPLN 285
           Y S N  +Y HQ  VA P N
Sbjct: 5   YNSTN--MYRHQQAVAAPAN 22


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 80  HAALREVHFECRVDHLRHLT 21
           H    EV+ EC   HL+  T
Sbjct: 398 HLGGDEVNLECWAQHLQKTT 417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,674
Number of Sequences: 336
Number of extensions: 1168
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)