Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H12
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    38   3e-05
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   1.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   3.0  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    20   6.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 37.5 bits (83), Expect = 3e-05
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
 Frame = +3

Query: 33  TDTAVKMMKEGTMSED--DFIEEAKVMTKL-QHQNLVQLYGVCSKHR---PIYIVTEFMR 194
           T  AVKM+KE   SE+   F +E  +M  + QH  +V L G  ++ R   P+ +V E+  
Sbjct: 478 TQVAVKMLKESPTSEEIRQFTQEINIMKSVRQHPYIVSLIGCVTEGRAEGPL-LVVEYCS 536

Query: 195 YGSLFNYLR 221
            G L  YLR
Sbjct: 537 RGDLQTYLR 545


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 166  GRCFEQTPYNCTRFWCCN 113
            GR F     NC +++ CN
Sbjct: 2239 GRLFVADDTNCAQYYLCN 2256


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 139 NCTRFWCC 116
           +CTR+W C
Sbjct: 111 SCTRYWTC 118


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 190 INSVTMYIGRCF 155
           + S+ +Y+G CF
Sbjct: 127 VKSIDVYLGTCF 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,040
Number of Sequences: 336
Number of extensions: 1328
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)