Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H11
         (463 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    45   4e-07
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.34 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.45 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 44.8 bits (101), Expect = 4e-07
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 15  EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQS 167
           ++Y+HRIGRTGR   KG + +FF     R  A DL  +L +A Q I   L S
Sbjct: 491 DEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGS 542


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 78  FFTPSNSRQA---KDLVSVLQEANQIISPQL 161
           FF+P   R     K LV V +  NQ+ +PQL
Sbjct: 73  FFSPKIKRMVLLHKTLVRVAKSLNQVFAPQL 103


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = -2

Query: 297 IFDVHHLLCRNCYYHAXXXXXXXXXXXICFC--SIHRLHLRC 178
           IF VH LLC   +Y+A             F   ++H L L C
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLC 132


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 49  DPKLKELHMHSLPHPTPAKLKISSP 123
           D +LKEL     P P P K+    P
Sbjct: 241 DEQLKELENPPTPKPRPTKVSRRKP 265


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 353 SNPRMSTCVKYLVNICSCG 409
           S     TC+   +N C CG
Sbjct: 33  SQKGQKTCLNLSINYCICG 51


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 39  RTGRSKAKGTSYAFFTPSNSRQAKD 113
           R GR+ A+G  Y  F P +    +D
Sbjct: 70  RYGRAAAQGMPYPRFPPYDRMDIRD 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,511
Number of Sequences: 336
Number of extensions: 1350
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)