Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H11
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 74 4e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 3e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 1e-05
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 44 4e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 4e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 1e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 1e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 1e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 42 3e-04
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 42 3e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 42 3e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 41 5e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 41 5e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 41 5e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.002
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 36 0.014
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 36 0.014
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 32 0.17
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 32 0.17
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 32 0.23
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.40
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 30 0.93
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 29 1.2
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 29 1.2
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 29 1.2
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 28 2.8
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 27 4.9
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 27 4.9
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 4.9
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 27 4.9
AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical... 27 8.6
AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical... 27 8.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 74.1 bits (174), Expect = 4e-14
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 176
SEDY+HRIGRTGRS KGT+Y FFT +N+ +AKDL+ VL EA Q + L+ MA+
Sbjct: 457 SEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMAN 511
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.0 bits (109), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
++Y+HRIGRTGR G + +FF N A++L+ ++ EANQ + L+ M+
Sbjct: 509 DEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGMS 561
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 479 SDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 532
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 463 SDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 516
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 460 SDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 513
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 3 ARGSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
AR + ++HRIGRTGR+ KGT+Y T + LV L+ +Q + L +A
Sbjct: 588 ARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLA 644
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 176
E+Y+HR+GRTGR+ KG + +F ++ + L+ +L+++ Q + QL+ A+
Sbjct: 420 EEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAE 473
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 3 ARGSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEA 137
A+ EDY HRIGRTGR+ G + F TP ++ DL VL E+
Sbjct: 651 AKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
+DYIHRIGRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 688 DDYIHRIGRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
+DYIHRIGRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 688 DDYIHRIGRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 173
+DYIHRIGRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 688 DDYIHRIGRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQA-KDLVSVLQEANQIISPQLQSMA 173
E+Y+HRIGRTGRS KG + F + DL +L EA Q + L+ +A
Sbjct: 523 ENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 122
E+YIHRIGR+GR KG + F T +++RQ K++ S
Sbjct: 350 ENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 122
E+YIHRIGR+GR KG + F T +++RQ K++ S
Sbjct: 63 ENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 98
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 122
E+YIHRIGR+GR KG + F T +++RQ K++ S
Sbjct: 350 ENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ 104
EDY+HR+GRTGR+ KG +Y F P + +
Sbjct: 634 EDYVHRVGRTGRAGRKGYAYTFVLPEHQEK 663
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 40.7 bits (91), Expect = 5e-04
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 21 YIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 170
YIHR+GRTGR+ G + +FT ++ + K + +V++++ + L M
Sbjct: 459 YIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYLMEM 508
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 164
+DYIHRIGRTGR G + +F + + +LV VL +A+Q++ +Q
Sbjct: 899 DDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 164
+DYIHRIGRTGR G + +F + + +LV VL +A+Q++ +Q
Sbjct: 899 DDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 164
+DYIHRIGRTGR G + +F + + +LV VL +A+Q++ +Q
Sbjct: 899 DDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 GSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 143
G ++Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1084 GFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 9 GSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 143
G ++Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1084 GFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 173
+DYIHRIGRTGR G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 645 DDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 173
+DYIHRIGRTGR G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 645 DDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQ 143
++ YIHR+GRT R KGT+ +F PS + L + +E NQ
Sbjct: 389 TDAYIHRVGRTARGFNKGTALSFCIPS---ERAHLEQIQEEINQ 429
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQ 143
++ YIHR+GRT R KGT+ +F PS + L + +E NQ
Sbjct: 456 TDAYIHRVGRTARGFNKGTALSFCIPS---ERAHLEQIQEEINQ 496
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 170
E YIHRIGR+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 347 ELYIHRIGRSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 170
E YIHRIGR+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 347 ELYIHRIGRSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 6 RGSEDYIHRIGRTGRS--KAKGTSYAFFTPSNSRQA 107
+G++ +IHR GRTGR+ K G +F P + R +
Sbjct: 730 QGADTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDS 765
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPS 92
+DYIHR+GR+ R G S +PS
Sbjct: 404 DDYIHRVGRSARMDDSGNSLLMVSPS 429
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 29.9 bits (64), Expect = 0.93
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 12 SEDYIHRIGRTGRSKAKGTSYAFFT 86
S+DY+HR+GRT R+ G + T
Sbjct: 364 SKDYVHRVGRTARAGRSGIAITVVT 388
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 122
+ YIHR+GRT R+ G S + + K++V+
Sbjct: 499 KQYIHRVGRTARAGKAGRSISLVGEDERKLLKEIVN 534
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 21 YIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 170
YIHR+GR+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 421 YIHRVGRSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 21 YIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 170
YIHR+GR+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 421 YIHRVGRSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 146
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 554 ETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 594
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 146
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 579 ETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 619
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 146
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 963 ETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 1003
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 6 RGSEDYIHRIGRTGRSKAKGTSYAFFT 86
R +E Y+HRIGR+GR G + T
Sbjct: 359 RNAETYLHRIGRSGRFGHLGVAINLIT 385
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ 104
E YIHR GRT R+ +G + P SRQ
Sbjct: 355 EIYIHRSGRTARASHRGLTVVLVDPP-SRQ 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 15 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ 104
E YIHR GRT R+ +G + P SRQ
Sbjct: 522 EIYIHRSGRTARASHRGLTVVLVDPP-SRQ 550
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 4 HEALRITFIELVGQEDPKLKELHMHSLPHPTPAKLKISSPF 126
HE + T + +G + +L EL H HP +LK+ +PF
Sbjct: 221 HE-VETTPLPYLGIDSLRLAELEYHVASHPQFLELKLKAPF 260
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 21 YIHRIGRTGRSKAKGTS 71
Y+HRIGR GR++ G S
Sbjct: 589 YVHRIGRVGRAERMGLS 605
>AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical
protein Y39B6A.43b protein.
Length = 734
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 25 FIELVGQEDPKLKELHMHSLPHPTPAKLKISSP 123
F+E G DP ++ L + P P P +++ P
Sbjct: 614 FVEATGSMDPVVENLQKNLAPSPPPLLKRVTFP 646
>AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical
protein Y39B6A.43a protein.
Length = 731
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 25 FIELVGQEDPKLKELHMHSLPHPTPAKLKISSP 123
F+E G DP ++ L + P P P +++ P
Sbjct: 611 FVEATGSMDPVVENLQKNLAPSPPPLLKRVTFP 643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,252,595
Number of Sequences: 27780
Number of extensions: 128454
Number of successful extensions: 360
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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