Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H09
(475 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 136 1e-32
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 127 4e-30
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 1e-22
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 1e-22
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 102 1e-22
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 102 1e-22
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 77 8e-15
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 48 5e-06
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.023
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 33 0.092
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.12
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 32 0.28
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_54044| Best HMM Match : PARP (HMM E-Value=0.078) 30 1.1
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 3.4
SB_31052| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-14) 28 4.5
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 4.5
SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 136 bits (328), Expect = 1e-32
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = -2
Query: 369 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 190
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
Query: 189 KKKIK 175
KKK+K
Sbjct: 74 KKKLK 78
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 127 bits (307), Expect = 4e-30
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = -2
Query: 453 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMI 274
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLRILA KYNC+KMI
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMI 61
Query: 273 CR 268
CR
Sbjct: 62 CR 63
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 485 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 346
KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL L
Sbjct: 104 KIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 77.0 bits (181), Expect = 8e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 370
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 107 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -2
Query: 369 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 268
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -2
Query: 471 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 307
I+ K G P DQQRL+F G+ L D T I +TLHL++RL GG P+ R+
Sbjct: 101 IEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGGEC-PTYRL 154
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = -2
Query: 462 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 379
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 33.5 bits (73), Expect = 0.092
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 370
+I+ K GIP D QRL F K+L D TL+ N+++
Sbjct: 35 RIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -2
Query: 456 GIPPDQQRLIFAGKQLEDGRTLSDYN 379
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 462 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 364
K+ P +LI+AGK L D L +YNI ++S
Sbjct: 102 KDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 253 SPSSCNQLQEDQVWTHKQPPPQEEDQ 176
SP Q+ Q+W QPPPQ +DQ
Sbjct: 211 SPPGRGPPQDQQMWVAHQPPPQPQDQ 236
>SB_54044| Best HMM Match : PARP (HMM E-Value=0.078)
Length = 489
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 464 IRRASPQINSDSSLPASNWKMAVHCLTTTFKKSPPFTWF 348
IRR + +SD A VHCL T K TWF
Sbjct: 241 IRRMLTEFDSDPRRVAQELATNVHCLKKTNSKKTKVTWF 279
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 273 CRKCYARLHPRATNCRKTKCGHTNNLRPKKKI 178
CRK Y LHP T C C N R KK +
Sbjct: 21 CRKVY--LHPLVTGCGHVLCTKCYNKRSKKHL 50
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 291 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 190
N + ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 291 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 190
N + ++CR C R +P KC +T N RP
Sbjct: 435 NPDYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 467
>SB_31052| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-14)
Length = 283
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 160 INKLILDLLLGAE---VVCVSTLGLPAIG-----CTRMETSIALATNHFLTVVLHSQD 309
IN I D L GA VVC+ + + TR + +I LA HF+++ L SQD
Sbjct: 55 INLAITDFLFGAAYAPVVCIELMDFNPLQPNLLRITREKINIFLALIHFVSLALISQD 112
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -2
Query: 447 PDQQRLIFAGKQLEDGRTLSDY--NIQKESTLHLVLRLRGGTI 325
PD ++ I G L+DG+T+ D + ++E L+ ++ GT+
Sbjct: 538 PDSKKNILEGLDLQDGKTVEDLLSDYRRELELYRQIKDENGTV 580
>SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 475 EDPR*GGHPPRSTATHLCRQATGRWPYI 392
+D GG+P R TH+ R + RWP +
Sbjct: 127 DDDDDGGYPNRDRYTHVKRASHYRWPIL 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,523,873
Number of Sequences: 59808
Number of extensions: 325003
Number of successful extensions: 748
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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