Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H09
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    102   6e-24
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   2.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   4.1  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   5.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.2  
AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    22   9.5  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  102 bits (245), Expect = 6e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = -2

Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76



 Score =  102 bits (245), Expect = 6e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = -2

Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score =  102 bits (245), Expect = 6e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = -2

Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 271 SQVLCSSPSSCNQLQEDQVWTHKQPPPQEEDQGL 170
           S   CSS +  +    D    H+ P PQ  +Q L
Sbjct: 357 SSANCSSAAPKSTAHPDHFLDHRSPSPQRGNQSL 390


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 271 SQVLCSSPSSCNQLQEDQVWTHKQPPPQEEDQ 176
           S+V+  +PSS   L  + +     PPPQ++ Q
Sbjct: 453 SRVIQRTPSSSPPLTPNTICGLIAPPPQQQQQ 484


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 INP*SSSWGGGCLCVHTW 221
           INP   + GGG +C H W
Sbjct: 378 INP-DKTCGGGWVCEHRW 394


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 462 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 340
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 282 KMICRKCYARLHPRATNC 229
           K +CRKC    HPR   C
Sbjct: 633 KAVCRKC----HPRCKKC 646


>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 272 VASAMLVSILVQPIAGRP 219
           VA A+LV + VQP+ G P
Sbjct: 10  VAIAVLVVVGVQPVDGAP 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,034
Number of Sequences: 2352
Number of extensions: 10490
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)