Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H09
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 189 8e-49
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 189 8e-49
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 103 5e-23
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 102 1e-22
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 102 1e-22
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 71 4e-13
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 59 1e-09
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 47 6e-06
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 47 6e-06
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.020
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.020
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.32
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.3
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 29 2.3
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 29 2.3
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 29 2.3
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.9
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 5.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 5.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 5.2
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 5.2
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 6.9
Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical pr... 27 9.1
U58757-7|AAC47917.1| 159|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 27 9.1
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 27 9.1
AL023828-25|CAD56605.1| 167|Caenorhabditis elegans Hypothetical... 27 9.1
AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein. 27 9.1
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 189 bits (461), Expect = 8e-49
Identities = 87/100 (87%), Positives = 92/100 (92%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 295
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQK 88
Query: 294 YNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRPKKKIK 175
YNC+K ICRKCYARL PRA+NCRK KCGH++ LR KKK+K
Sbjct: 89 YNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 128
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 189 bits (461), Expect = 8e-49
Identities = 87/100 (87%), Positives = 92/100 (92%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 295
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQK 88
Query: 294 YNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRPKKKIK 175
YNC+K ICRKCYARL PRA+NCRK KCGH++ LR KKK+K
Sbjct: 89 YNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 128
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 103 bits (248), Expect = 5e-23
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG I
Sbjct: 789 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 485 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 561 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 637 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 713 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAG 418
KIQDKEGIPPDQQRLIFAG
Sbjct: 485 KIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 409 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 485 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 561 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 637 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 102 bits (245), Expect = 1e-22
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 713 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 102 bits (245), Expect = 1e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLVLRLRGG I
Sbjct: 789 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 70.9 bits (166), Expect = 4e-13
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLVL LRGG
Sbjct: 29 KVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 337
K+Q+K G+PPDQQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 189 KVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 408 EDGRTLSDYNIQKESTLHL 352
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 27 KIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 27 KIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -2
Query: 471 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 343
I+ + IP L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 182 IEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.020
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
+IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 605 QIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.020
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
+IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++ RGG
Sbjct: 605 QIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 435 RLIFAGKQLEDGRTLSDYNIQKESTLHL 352
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 273 CRKCYARLHPRATNCRKTKCGHT 205
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 435 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 337
R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 265 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 182
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 265 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 182
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 265 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 182
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 265 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 182
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -2
Query: 432 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
L + G++L+D R++ YNI + ++L + + T+
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYLKKKKKLSTL 164
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 5.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 459 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 307
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 459 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 307
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 459 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 307
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 201 CLCVHTWSSCNWLHEDGDEHSTCDKSFSHS 290
CL H++ +C + E D+ +CD+S SHS
Sbjct: 486 CLGKHSFQTCRRV-ESHDQSRSCDRSPSHS 514
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 358
+I GI R K LED TL+ YNI++ ST+
Sbjct: 190 RINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 417 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 295
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
>Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical
protein F09B12.6 protein.
Length = 570
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 425 LPASNWKMAVHCLTTTFKKSPPFTWF*DLEEVP 327
LPA W + + K+ P F +F ++E+P
Sbjct: 240 LPADIWALGCTFIEMLLKRPPHFEYFGHIDEIP 272
>U58757-7|AAC47917.1| 159|Caenorhabditis elegans Hypothetical
protein C01B10.7 protein.
Length = 159
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 225 KTKCGHTNNLRPKKKI 178
KTKCG+ N++ KKK+
Sbjct: 101 KTKCGYWENVKTKKKV 116
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +3
Query: 156 ENQQINP*SSSWGGGCLCVHTWSSCNWLHEDGDEHSTCDKSFSHSCTS*PRCEEMAQWYL 335
EN NP GGC S C W + T D F+ CT+ P CEE+ Y+
Sbjct: 19 ENSSYNP------GGCSVDFDKSLC-WASAHIGQQMTRDCPFTF-CTAIPGCEEIKDRYM 70
Query: 336 L 338
+
Sbjct: 71 V 71
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +3
Query: 156 ENQQINP*SSSWGGGCLCVHTWSSCNWLHEDGDEHSTCDKSFSHSCTS*PRCEEMAQWYL 335
EN NP GGC S C W + T D F+ CT+ P CEE+ Y+
Sbjct: 19 ENSSYNP------GGCSVDFDKSLC-WASAHIGQQMTRDCPFTF-CTAIPGCEEIKDRYM 70
Query: 336 L 338
+
Sbjct: 71 V 71
>AL023828-25|CAD56605.1| 167|Caenorhabditis elegans Hypothetical
protein Y17G7B.22 protein.
Length = 167
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 333 GTIEPSLRILAMKYNCEKMI---CRKCYARLHPRATNCRKTKCGHTNNLRPKKKIK 175
G + +R L +++N + + C+KC + H + + H N P+KK K
Sbjct: 43 GEVTEGVRKLNVEWNEDNELLFACQKCMSAFHAESDLSNHEQLTHFNRNIPRKKFK 98
>AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein.
Length = 570
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 425 LPASNWKMAVHCLTTTFKKSPPFTWF*DLEEVP 327
LPA W + + K+ P F +F ++E+P
Sbjct: 240 LPADIWALGCTFIEMLLKRPPHFEYFGHIDEIP 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,486,981
Number of Sequences: 27780
Number of extensions: 246688
Number of successful extensions: 678
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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