BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_H09 (475 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.7 AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 21 6.7 AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.7 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.9 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.9 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.0 bits (47), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 Query: 274 LSQVLCSSPSSCNQLQEDQVWTHKQPPP 191 LS+ + SS S E W +QPPP Sbjct: 1330 LSEHIYSSIDSDYSTLERTAWRQQQPPP 1357 Score = 22.2 bits (45), Expect = 2.9 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +3 Query: 222 SSCNWLHEDGDEHSTCD 272 +SC WL E G++ + D Sbjct: 29 TSCKWLSEGGNDTRSAD 45 >AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. Length = 88 Score = 21.0 bits (42), Expect = 6.7 Identities = 7/22 (31%), Positives = 10/22 (45%) Frame = +3 Query: 183 SSWGGGCLCVHTWSSCNWLHED 248 + W C+ V NW+H D Sbjct: 51 NKWSKVCIVVRRKLEENWIHVD 72 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 21.0 bits (42), Expect = 6.7 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 197 RLFVCPHLVFLQLVARG 247 +L +C LVF+Q++ G Sbjct: 768 QLIICSGLVFVQILING 784 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 20.6 bits (41), Expect = 8.9 Identities = 8/25 (32%), Positives = 10/25 (40%) Frame = -1 Query: 241 CNQLQEDQVWTHKQPPPQEEDQGLI 167 C L + QPPP G+I Sbjct: 1120 CAALTSQSLQVSWQPPPNTHSNGII 1144 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 20.6 bits (41), Expect = 8.9 Identities = 8/25 (32%), Positives = 10/25 (40%) Frame = -1 Query: 241 CNQLQEDQVWTHKQPPPQEEDQGLI 167 C L + QPPP G+I Sbjct: 1116 CAALTSQSLQVSWQPPPNTHSNGII 1140 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 136,835 Number of Sequences: 438 Number of extensions: 2979 Number of successful extensions: 6 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12805416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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