Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H09
(475 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 194 2e-50
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 194 2e-50
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 103 5e-23
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 103 5e-23
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 101 2e-22
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 101 2e-22
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 101 2e-22
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 101 2e-22
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 101 2e-22
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 101 2e-22
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 101 2e-22
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 101 2e-22
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 101 2e-22
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 101 2e-22
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 101 2e-22
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 101 2e-22
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 101 2e-22
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 101 2e-22
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 101 2e-22
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 101 2e-22
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 101 2e-22
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 99 8e-22
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 93 1e-19
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 77 8e-15
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 64 5e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 50 1e-06
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 42 2e-04
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 42 2e-04
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 40 7e-04
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 38 0.005
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 38 0.005
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 37 0.006
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 37 0.006
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 37 0.006
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 35 0.024
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 33 0.13
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 33 0.13
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 32 0.17
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 32 0.23
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 32 0.23
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 31 0.40
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 31 0.53
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 30 0.70
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 29 1.2
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 29 1.6
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 29 1.6
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 28 3.7
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 4.9
At1g51130.1 68414.m05748 expressed protein similar to unknown pr... 27 6.5
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 194 bits (474), Expect = 2e-50
Identities = 89/100 (89%), Positives = 93/100 (93%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 295
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG IEPSL +LA K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMMLARK 88
Query: 294 YNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRPKKKIK 175
YN +KMICRKCYARLHPRA NCRK KCGH+N LRPKKKIK
Sbjct: 89 YNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 194 bits (474), Expect = 2e-50
Identities = 89/100 (89%), Positives = 93/100 (93%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 295
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG IEPSL +LA K
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMMLARK 88
Query: 294 YNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRPKKKIK 175
YN +KMICRKCYARLHPRA NCRK KCGH+N LRPKKKIK
Sbjct: 89 YNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 103 bits (248), Expect = 5e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGT+
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTM 78
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG +
Sbjct: 105 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 103 bits (248), Expect = 5e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 325
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGT+
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTM 78
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 105 RVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 101 bits (243), Expect = 2e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 328
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 381
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 101 bits (243), Expect = 2e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 328
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 101 bits (243), Expect = 2e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 328
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 94.3 bits (224), Expect = 4e-20
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 53.6 bits (123), Expect = 7e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDG 400
KIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 256 KIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 328
KIQDKEGI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 181 KIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLRGGS 229
Score = 90.2 bits (214), Expect = 6e-19
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+LR RGG
Sbjct: 29 KIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGG 76
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 101 bits (242), Expect = 2e-22
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 29 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 99 bits (238), Expect = 8e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 107 KIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGG 154
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 183 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 86.2 bits (204), Expect = 1e-17
Identities = 43/49 (87%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 331
KIQDKE I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 259 KIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 81.8 bits (193), Expect = 2e-16
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL LRLRGG
Sbjct: 31 KIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 92.7 bits (220), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 31 KIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGG 78
Score = 91.1 bits (216), Expect = 4e-19
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 107 KIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 72.5 bits (170), Expect = 1e-13
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R G
Sbjct: 421 KIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHG 468
Score = 71.7 bits (168), Expect = 2e-13
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 337
KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 580 KIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
K+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R G
Sbjct: 271 KLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCG 318
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
Frame = -2
Query: 471 IQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 337
+QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 348 VQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 64.5 bits (150), Expect = 3e-11
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRG 334
KIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L LRLRG
Sbjct: 188 KIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 61.3 bits (142), Expect = 3e-10
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGG
Sbjct: 504 KIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 340
KIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 114 KIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 64.1 bits (149), Expect = 5e-11
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
+I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG
Sbjct: 29 RIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 343
KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL++R
Sbjct: 52 KIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 471 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 349
+ +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 VAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -2
Query: 471 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 349
I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 IAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/46 (39%), Positives = 34/46 (73%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 337
+I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 124 RIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = -2
Query: 456 GIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 349
G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 45 GVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
+I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG
Sbjct: 38 RIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGG 81
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAM 298
+IQ G Q+L+F G++L + DY + + + LHLVL+L L++L +
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL------SDLQVLDV 115
Query: 297 KYNCEKMICR 268
K C K CR
Sbjct: 116 KTTCGKH-CR 124
Score = 35.9 bits (79), Expect = 0.014
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = -2
Query: 474 KIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 343
+I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 139 QISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAM 298
+IQ G Q+L+F G++L + DY + + + LHLVL+L L++L +
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL------SDLQVLDV 115
Query: 297 KYNCEKMICR 268
K C K CR
Sbjct: 116 KTTCGKH-CR 124
Score = 35.9 bits (79), Expect = 0.014
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = -2
Query: 474 KIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 343
+I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 139 QISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2
Query: 471 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 358
I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 170 IHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 33.1 bits (72), Expect = 0.099
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 13/58 (22%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 340
K ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 78 KHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 35.1 bits (77), Expect = 0.024
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRL 340
+IQ G +Q+L+F+G++L + + DY + S LHLVL+L
Sbjct: 62 RIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKL 107
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 468 QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 343
++ +G P D Q ++F G++L+D R + S +HL+++
Sbjct: 142 KEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVK 184
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 32.7 bits (71), Expect = 0.13
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = -2
Query: 435 RLIFAGKQLEDGRTLSDYNIQKESTLHLV 349
++ + GK+LED ++L++ N+Q S +HL+
Sbjct: 542 KMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 32.7 bits (71), Expect = 0.13
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT--IEPSLRILA 301
+I ++ IP QRLI G Q+ +S Q ++T++LVL LRGG + LR +
Sbjct: 38 RIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGGKGGLGSLLRNVV 93
Query: 300 MKYNCEK 280
MK +K
Sbjct: 94 MKAGQKK 100
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 352
KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 31.9 bits (69), Expect = 0.23
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 352
KI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 29 KIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 31.9 bits (69), Expect = 0.23
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 358
KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 31.1 bits (67), Expect = 0.40
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 735 KIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 30.7 bits (66), Expect = 0.53
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = -2
Query: 435 RLIFAGKQLEDGRTLSDYNIQKESTLHLV 349
++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 703 KMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTLHLVLRLRGG 331
KI D G+ Q L GK ++ G T+ DY I+ H+ R+RGG
Sbjct: 29 KIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSDRMRGG 79
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRL 340
+IQ +G +Q+L++ G+++ + + DY + LHLV+RL
Sbjct: 60 RIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRL 105
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -2
Query: 468 QDKE-GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 346
++KE GIP D + L G++L+D R ++D ++ +HL++
Sbjct: 141 KEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIHLLI 181
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 456 GIPPDQQRLIFAGKQLED 403
G+ P QQRL+F GK+ ED
Sbjct: 103 GLEPKQQRLVFKGKERED 120
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = -2
Query: 468 QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KESTLHLVLRL 340
+DKE P + +LI AGK LE+ RTL++ + T+H+VLRL
Sbjct: 44 KDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRL 94
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = -2
Query: 474 KIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 358
++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 29 EVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -2
Query: 393 LSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 229
LS+ +I++E + + + + P NC +C KCY H R+ +C
Sbjct: 136 LSEIDIEREEECGICMEMNNMVVLP---------NCTHSLCIKCYRDWHGRSESC 181
>At1g51130.1 68414.m05748 expressed protein similar to unknown
protein GI:9294403 from [Arabidopsis thaliana]
Length = 403
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 229 QEDQVWTHKQPPPQEEDQGL 170
+ D V + PPPQEE+QG+
Sbjct: 37 EADSVRPDEPPPPQEEEQGI 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,988,417
Number of Sequences: 28952
Number of extensions: 232998
Number of successful extensions: 668
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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