Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H08
         (514 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1GCI0 Cluster: Putative uncharacterized protein; n=1; ...    41   0.014
UniRef50_Q16PR5 Cluster: Metalloproteinase, putative; n=4; Culic...    38   0.10 
UniRef50_Q16PR1 Cluster: Metalloproteinase, putative; n=2; Aedes...    38   0.10 
UniRef50_Q16PS5 Cluster: Metalloproteinase, putative; n=2; Aedes...    38   0.18 
UniRef50_Q4V4J5 Cluster: IP11101p; n=3; Sophophora|Rep: IP11101p...    37   0.31 
UniRef50_Q2R0D8 Cluster: Putative uncharacterized protein; n=2; ...    36   0.54 
UniRef50_Q7R4B1 Cluster: GLP_480_43666_50334; n=1; Giardia lambl...    36   0.72 
UniRef50_A7SEU5 Cluster: Predicted protein; n=4; Nematostella ve...    34   1.7  
UniRef50_Q2R0E2 Cluster: Putative uncharacterized protein; n=4; ...    33   3.8  
UniRef50_Q9UBI4 Cluster: Stomatin-like protein 1; n=27; Amniota|...    33   3.8  

>UniRef50_A1GCI0 Cluster: Putative uncharacterized protein; n=1;
           Salinispora arenicola CNS205|Rep: Putative
           uncharacterized protein - Salinispora arenicola CNS205
          Length = 401

 Score = 41.1 bits (92), Expect = 0.014
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = +1

Query: 169 IYLW-LAVI*KAQRTNWAQCNINLTVFLTQLLR-SVQRTLNIYKMLLVILGTLV-IAVTS 339
           IYL  L ++  +   +W++ N+NL     QL    V      Y  + ++LGT+  +    
Sbjct: 290 IYLLALIIMPSSLAADWSKSNVNLVD--AQLFGWDVNIPAGPYLHVALLLGTVASVGFAG 347

Query: 340 LPISEDKFFIDYSDGVIGEFGEHFEGDMVLTSKQKQAITAAMDARNGLKGGTKRWP 507
             ++E+K+F +++ G+IG+  E +     LT        A +DA  G+KG ++R P
Sbjct: 348 FVLTEEKYFEEFTKGIIGKPAEQY-----LTLALPYLALADVDAGEGVKGESRRTP 398


>UniRef50_Q16PR5 Cluster: Metalloproteinase, putative; n=4;
           Culicidae|Rep: Metalloproteinase, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 264

 Score = 38.3 bits (85), Expect = 0.10
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +1

Query: 394 EFGEHFEGDMVLTSKQKQAITAAMDARNGLKGGTKRWPN 510
           E G HFEGD+VL S Q++ I      R  L G + RWPN
Sbjct: 44  EIGGHFEGDIVLDSTQEEIIAT---GRTALIGPSYRWPN 79


>UniRef50_Q16PR1 Cluster: Metalloproteinase, putative; n=2; Aedes
           aegypti|Rep: Metalloproteinase, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 258

 Score = 38.3 bits (85), Expect = 0.10
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +1

Query: 394 EFGEHFEGDMVLTSKQKQAITAAMDARNGLKGGTKRWPN 510
           E GE+FEGDM+L S+QK A   ++  RN       RWPN
Sbjct: 28  EQGENFEGDMILNSEQKMATEGSL--RNVFIAKKYRWPN 64


>UniRef50_Q16PS5 Cluster: Metalloproteinase, putative; n=2; Aedes
           aegypti|Rep: Metalloproteinase, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 257

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +1

Query: 406 HFEGDMVLTSKQKQAITAAMDARNGLKGGTKRWPN 510
           +FEGDM+L+ +Q+QA+ A M  RNGL     RWPN
Sbjct: 37  NFEGDMILSKEQRQAL-AGM--RNGLFDDQYRWPN 68


>UniRef50_Q4V4J5 Cluster: IP11101p; n=3; Sophophora|Rep: IP11101p -
           Drosophila melanogaster (Fruit fly)
          Length = 267

 Score = 36.7 bits (81), Expect = 0.31
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 394 EFGEHFEGDMVLTSKQKQAIT-AAMDARNGLKGGTKRWP 507
           E G   EGDM+LT +Q++ +   A  ARNGL    KRWP
Sbjct: 37  EAGGFVEGDMMLTEEQQRNLEQGAPKARNGLINTEKRWP 75


>UniRef50_Q2R0D8 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 1133

 Score = 35.9 bits (79), Expect = 0.54
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
 Frame = -3

Query: 506 GHLFVPPLSPFRASIAAVIACFCLEVNTISPSKCSPNSPMTPSE*SIKNLSSEIGRLVTA 327
           G LF     P R  ++    CF +  +    ++   +  M  SE + KN   E  R +  
Sbjct: 294 GDLFFLSTQPLRGQLSG---CFGIATDVGCDNQFQRSFKMLVSE-NQKNTDLESIRYICF 349

Query: 326 ITNVP---KITKSIL*IFNVRCTLLSNCVRKTVRLMLHCAQLVLCAF*ITAS 180
           +TN+     I+K+++ + + RC ++++ +R+  +    CA   LCAF I  S
Sbjct: 350 LTNIMDNLNISKAMVTMSSGRCGIINSIIRRNEKCKKTCACAELCAFGIEDS 401


>UniRef50_Q7R4B1 Cluster: GLP_480_43666_50334; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_480_43666_50334 - Giardia lamblia
            ATCC 50803
          Length = 2222

 Score = 35.5 bits (78), Expect = 0.72
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -3

Query: 476  FRASIAAVIACFCLEVNTISPSKCSPNSPMTPSE*SIKNLSSEIGRLVTAITNVPKITKS 297
            F+   + ++      + + SPS+    SP+ P     +N+  ++GRL   I+    I K 
Sbjct: 1652 FKTESSVLVTPSISALRSTSPSR----SPLQPLAQLPQNMEDDLGRLNFLISRCDSIAKR 1707

Query: 296  IL*IFNVRCTLLSNCVRKTVRL 231
            IL +   + TL+S CVR +  L
Sbjct: 1708 ILDLLEKQKTLISACVRMSYAL 1729


>UniRef50_A7SEU5 Cluster: Predicted protein; n=4; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 310

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 409 FEGDMVLTSKQKQAI-TAAMDARNGLKGGTKRWPN 510
           FEGDM+LT  Q+QA+    + A  G     K+WPN
Sbjct: 32  FEGDMILTPDQQQAVNNGDLGASRGAPIHDKKWPN 66


>UniRef50_Q2R0E2 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 1197

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
 Frame = -3

Query: 506 GHLFVPPLSPFRASIAAVIACFCLEVNTISPSKCSPNSPMTPSE*SIKNLSSEIGRLVTA 327
           G LF     P R  ++    CF +  +    ++   +  M  SE + K    E  R +  
Sbjct: 294 GDLFFLSSQPLRGQLSG---CFGIATDVGCDNQFQRSFKMLVSE-NQKKTDLESIRYICF 349

Query: 326 ITNVP---KITKSIL*IFNVRCTLLSNCVRKTVRLMLHCAQLVLCAF*ITAS 180
           +TN+     I+K+++ + + RC ++++ +R+  +    CA   LCAF I  S
Sbjct: 350 LTNIVDNLNISKAMVTMSSGRCGIINSIIRRNEKCKKTCACAELCAFGIEDS 401


>UniRef50_Q9UBI4 Cluster: Stomatin-like protein 1; n=27;
           Amniota|Rep: Stomatin-like protein 1 - Homo sapiens
           (Human)
          Length = 398

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = -2

Query: 201 RLLNNRKPQVYT*RSAGYR*YIT*LDYFINVCLRNEVFSVSPLELSAKDPAVLSSG 34
           R++  R  ++ T +  G    +  +D F  V LR   F+V P +L++KD AVLS G
Sbjct: 87  RMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVG 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,294,735
Number of Sequences: 1657284
Number of extensions: 9750947
Number of successful extensions: 22100
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22088
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)