Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H08
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.0  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    24   3.5  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    24   3.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   6.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.0  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 382 GVIGEFGEHFEGDMV-LTSKQKQAITAAMDARNGLKGGTKRW 504
           G IG +G   +  +     KQKQ  T A+ A  G +  T++W
Sbjct: 207 GAIGAYGPEKKTVVADAKQKQKQDDTKALPAAGGKEEETRQW 248


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 274 RTLNIYKMLLVILGTLVIAVTSLPISEDKFFIDYSD 381
           RTL I K L  I+  L + V  +PI E    +D+ D
Sbjct: 91  RTLEILKRLNRIVMILKLLVDQVPILETMTPLDFMD 126


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 274 RTLNIYKMLLVILGTLVIAVTSLPISEDKFFIDYSD 381
           RTL I K L  I+  L + V  +PI E    +D+ D
Sbjct: 91  RTLEILKRLNRIVMILKLLVDQVPILETMTPLDFMD 126


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 234 PYGFPHTVTKKCTTNI 281
           P G P TV K+C T +
Sbjct: 561 PDGIPSTVLKRCQTTV 576


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 214 WAQCNINLTVFLTQLLRSVQRTLNIYKMLLVILGTLVIAVTSLPI 348
           WA  + +  V L  + R V   L +    L  LGT++  V SL +
Sbjct: 327 WALASFSKNVRLQNVHRLVLTWLGVIFQFLWRLGTVISRVISLTV 371


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -1

Query: 67   ICEGSRRALIRTPTCMSDKCLV 2
            +CE ++R   +   C  D+C +
Sbjct: 1006 VCEAAKRITSKLQRCWDDECAI 1027


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,399
Number of Sequences: 2352
Number of extensions: 10228
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)