Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H07
(294 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 52 9e-08
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 50 2e-07
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 50 3e-07
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 50 3e-07
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 49 5e-07
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 38 0.001
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 31 0.19
AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical ... 27 1.8
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 27 3.1
AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical... 26 5.4
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 25 7.1
Z93380-2|CAB07596.1| 340|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 25 9.4
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical pr... 25 9.4
U58734-4|AAB52501.1| 274|Caenorhabditis elegans Hypothetical pr... 25 9.4
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 51.6 bits (118), Expect = 9e-08
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 MSEKHLQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEWIY 284
++ K ++ GD P S G RV+ MRFCP+AER +L + AK ++ ++V +N+ + EW +
Sbjct: 6 VTSKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYW 65
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 50.4 bits (115), Expect = 2e-07
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 123 LQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEW 278
L G + P + G R+++MRFCPYA+R ++ L KN+ ++V +N D P W
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNW 137
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 50.0 bits (114), Expect = 3e-07
Identities = 19/61 (31%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = +3
Query: 108 MSEKHLQTGDVLPQ--YSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEWI 281
++ K ++ GD P SG +R++ MR+CP+A+R ++ + K + +++ I+LD +P+W
Sbjct: 7 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 66
Query: 282 Y 284
+
Sbjct: 67 F 67
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 50.0 bits (114), Expect = 3e-07
Identities = 19/61 (31%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = +3
Query: 108 MSEKHLQTGDVLPQ--YSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEWI 281
++ K ++ GD P SG +R++ MR+CP+A+R ++ + K + +++ I+LD +P+W
Sbjct: 290 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 349
Query: 282 Y 284
+
Sbjct: 350 F 350
Score = 30.7 bits (66), Expect = 0.19
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 189 PYAERTVLVLNAKNLQYDLVFINLDPEPEWIY 284
P A+R ++ + KN+ D++ ++L +P+W +
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYF 59
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 49.2 bits (112), Expect = 5e-07
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +3
Query: 108 MSEKHLQTGDVLPQYSGK--LRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEWI 281
++ K L+TGD+ P R+++MRFCP A+R ++ + K + +++ INL +P+W
Sbjct: 7 INSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWY 66
Query: 282 Y 284
+
Sbjct: 67 F 67
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 123 LQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNL 233
L G + P + G R+++MRFCPYA+R ++ L KN+
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 30.7 bits (66), Expect = 0.19
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 189 PYAERTVLVLNAKNLQYDLVFINLDPEPEWIY 284
P A+R ++ + KN+ D++ ++L +P+W +
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYF 59
>AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical
protein F49F1.9 protein.
Length = 210
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 252 INLDPEPEWIYHFS 293
INLD E EW++HF+
Sbjct: 110 INLDREKEWLFHFA 123
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 228 SSRSTLIQFSRHKDRIS*QTHAVSHYIVAKHHRFANASRTLLFIFCLQNKLYYAQVLLCN 49
SSR T + D + + +S IV HR ++ +LLFI + LY +L+
Sbjct: 887 SSRLTALATDFRLDHV--KLLKMSSLIVCARHRMSSFRHSLLFIL-YASLLYSVTILMST 943
Query: 48 FF 43
FF
Sbjct: 944 FF 945
>AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical
protein Y102A5C.22 protein.
Length = 305
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 153 SGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDPEPEWI 281
S K F M F A LV + + Y L+ +DP +WI
Sbjct: 208 SAKKTNFEMSFLKQACLQALVFTCELVTYFLITPRIDPNKKWI 250
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 171 THAVSHYIVAKHHRFANASRTLLFIFCL 88
THA +H + HH F N +TL F +CL
Sbjct: 181 THAYTHALETDHHVFLNL-QTLKF-YCL 206
>Z93380-2|CAB07596.1| 340|Caenorhabditis elegans Hypothetical
protein F28C12.2 protein.
Length = 340
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 141 KHHRFANASRTLLFIFCLQNKLYYAQVLL 55
KH+ F+N++R L+ I CL N + + +L
Sbjct: 54 KHNIFSNSTR-LILIVCLLNSVVHQTTML 81
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 156 HYIVAKHHRFANASRTLLFIFCLQNKLYY 70
+++ A + NA +F CL KLY+
Sbjct: 186 YFVFATDNTIVNACLLSMFFICLPQKLYF 214
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 156 HYIVAKHHRFANASRTLLFIFCLQNKLYY 70
+++ A + NA +F CL KLY+
Sbjct: 186 YFVFATDNTIVNACLLSMFFICLPQKLYF 214
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 25.0 bits (52), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 121 ICKPVMFCHNIVGNCVC 171
+C P+ CHN +G+ C
Sbjct: 261 VCSPLSKCHNTLGSYYC 277
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 25.0 bits (52), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 121 ICKPVMFCHNIVGNCVC 171
+C P+ CHN +G+ C
Sbjct: 261 VCSPLSKCHNTLGSYYC 277
>Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical
protein F54D5.3 protein.
Length = 186
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 277 HSGSGSKLMNTKSYCKFFAFNTNTVL 200
+S GSKL NTK YC NT T L
Sbjct: 39 YSYGGSKL-NTKYYCFEGCLNTGTAL 63
>U58734-4|AAB52501.1| 274|Caenorhabditis elegans Hypothetical
protein T27A10.2 protein.
Length = 274
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 181 LIANTRSFPLYCGKTSPVCKCFS--DIVIYFLF 89
L + RSFP + G P CK F D+ +FL+
Sbjct: 203 LYFSLRSFPRFTGFMLPSCKNFKFRDLCWFFLY 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,536,141
Number of Sequences: 27780
Number of extensions: 151656
Number of successful extensions: 360
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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