Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H07
         (294 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   1.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   3.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   3.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   3.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   3.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   4.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.2  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    20   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.3  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 280 IHSGSGSKLMNTKSYCKFFAFNT 212
           I SG+ ++  N K+YC F   NT
Sbjct: 134 IVSGAMAERCNFKAYCLFSFLNT 156


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 155 WETACVCYEILSLCRENCIS 214
           W+  C+C+   SL    C++
Sbjct: 366 WDGVCMCFIYASLLEFVCVN 385


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 155 WETACVCYEILSLCRENCIS 214
           W+  C+C+   SL    C++
Sbjct: 335 WDGVCMCFIYASLLEFVCVN 354


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 155 WETACVCYEILSLCRENCIS 214
           W+  C+C+   SL    C++
Sbjct: 386 WDGVCMCFIYASLLEFVCVN 405


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 155 WETACVCYEILSLCRENCIS 214
           W+  C+C+   SL    C++
Sbjct: 335 WDGVCMCFIYASLLEFVCVN 354


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 176 YEILSLCRENCISVEREELAV*FGVH 253
           YE++    +NCI+V   E     G+H
Sbjct: 45  YEVVRDAYDNCITVCNMENVDPLGIH 70


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   ARGSHVNL*SAVFLKEIAQKNLCI 72
           + GS+      VF +E  ++N+CI
Sbjct: 146 SEGSYGEYGIEVFTREATERNVCI 169


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   ARGSHVNL*SAVFLKEIAQKNLCI 72
           + GS+      VF +E  ++N+CI
Sbjct: 236 SEGSYGEYGIEVFTREATERNVCI 259


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 169 TRSFPLYCGKTS 134
           T +FP  CGKT+
Sbjct: 15  TAAFPSACGKTN 26


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 158 PTILWQNITG 129
           PTI+W+  TG
Sbjct: 739 PTIVWKKATG 748


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 158 PTILWQNITG 129
           PTI+W+  TG
Sbjct: 735 PTIVWKKATG 744


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,477
Number of Sequences: 438
Number of extensions: 1955
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)