Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_H07
(294 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16710.1 68418.m01956 dehydroascorbate reductase, putative St... 38 9e-04
At1g19570.1 68414.m02437 dehydroascorbate reductase, putative si... 38 9e-04
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si... 36 0.006
At5g36270.1 68418.m04375 dehydroascorbate reductase, putative si... 31 0.13
At5g44990.1 68418.m05517 hypothetical protein 29 0.41
At4g19880.1 68417.m02914 glutathione S-transferase-related conta... 27 2.9
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 26 3.8
At1g56120.1 68414.m06444 leucine-rich repeat family protein / pr... 26 3.8
At1g04380.1 68414.m00428 2-oxoglutarate-dependent dioxygenase, p... 26 3.8
At1g59700.1 68414.m06716 glutathione S-transferase, putative sim... 26 5.0
At5g01900.1 68418.m00109 WRKY family transcription factor contai... 25 6.6
At1g03410.1 68414.m00321 2-oxoglutarate-dependent dioxygenase, p... 25 6.6
At3g57810.2 68416.m06445 OTU-like cysteine protease family prote... 25 8.7
At3g57810.1 68416.m06444 OTU-like cysteine protease family prote... 25 8.7
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 25 8.7
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 25 8.7
At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /... 25 8.7
>At5g16710.1 68418.m01956 dehydroascorbate reductase, putative
Strong similarity to dehydroascorbate reductase
[Spinacia oleracea] gi:10952512 gb:AAG24945
Length = 258
Score = 38.3 bits (85), Expect = 9e-04
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 186 CPYAERTVLVLNAKNLQYDLVFINLDPEPEWIYHFS 293
CP+ ++ +L + KN+ YD+ ++L +PEW S
Sbjct: 66 CPFCQKVLLTMEEKNVPYDMKMVDLSNKPEWFLKIS 101
>At1g19570.1 68414.m02437 dehydroascorbate reductase, putative
similar to GB:BAA90672 from (Oryza sativa)
Length = 213
Score = 38.3 bits (85), Expect = 9e-04
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 186 CPYAERTVLVLNAKNLQYDLVFINLDPEPEWIYHFS 293
CP+++R +L L K+L Y + INL +P+W S
Sbjct: 20 CPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDIS 55
>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
similar to GI:6939839 from [Oryza sativa]
Length = 213
Score = 35.5 bits (78), Expect = 0.006
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 186 CPYAERTVLVLNAKNLQYDLVFINLDPEPEWIYHFS 293
CP+++R +L L K L Y IN+ +P+W S
Sbjct: 20 CPFSQRVLLTLEEKKLPYKTHLINVSDKPQWFLDIS 55
>At5g36270.1 68418.m04375 dehydroascorbate reductase, putative
similar to dehydroascorbate reductase {Spinacia
oleracea} gi:10952511 gb:AF195783, PMID:11148269
Length = 217
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 186 CPYAERTVLVLNAKNLQYDLVFINLDPEPEWIYHFS 293
CP+ +R +L L K L Y I++ +P+W S
Sbjct: 20 CPFGQRILLTLEDKKLPYKTHLIDVSLKPDWFLAIS 55
>At5g44990.1 68418.m05517 hypothetical protein
Length = 350
Score = 29.5 bits (63), Expect = 0.41
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 144 PQYSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDP 266
P SG+ ++ CP+A R + +L K L + F ++ P
Sbjct: 32 PAESGRYHLYISYACPWASRCLAILKLKGLDKAISFSSVQP 72
>At4g19880.1 68417.m02914 glutathione S-transferase-related contains
weak hit to Pfam profile PF00043: Glutathione
S-transferase, C-terminal domain
Length = 325
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 144 PQYSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDP 266
P SG+ ++ CP+A R + L K L + F ++ P
Sbjct: 35 PAESGRYHLYISYACPWASRCLSYLKIKGLDDAISFSSVKP 75
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 6 RFTRQFVIGCFSKRNCTEEP 65
R T + V GCF+ +N TE+P
Sbjct: 167 RATHKDVKGCFANKNITEDP 186
>At1g56120.1 68414.m06444 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1045
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 166 RSFPLYCGKTSPVCKCFSDIVIYFLFTK*TVLCTGSSVQFLLEK 35
++FP C + +CKC I +F+ V G LLEK
Sbjct: 386 KNFP--CNRGEGICKCNKKIPSQIMFSMLNVQTYGQGSNVLLEK 427
>At1g04380.1 68414.m00428 2-oxoglutarate-dependent dioxygenase,
putative Strong similarity to Arabidopsis 2A6
(gb|X83096), tomato ethylene synthesis regulatory
protein E8 (SP|P10967)
Length = 345
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 188 TESHSKHTQFPTILWQNITGLQMLLGHCYL 99
T HS +T +L NI GLQ+L C++
Sbjct: 215 TSKHSDNTFITILLQDNIGGLQILHQDCWV 244
>At1g59700.1 68414.m06716 glutathione S-transferase, putative
similar to glutathione S-transferase GB:AAF29773
GI:6856103 from [Gossypium hirsutum]
Length = 234
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 159 KLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINL 260
++++ + + PYA R + L K++ YD V NL
Sbjct: 6 EVKLLGVWYSPYAIRPKIALRLKSVDYDYVEENL 39
>At5g01900.1 68418.m00109 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA binding domain
Length = 263
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 246 PNHTASSSRSTLIQFSRHKDRI 181
PN + SSS S L Q H+DRI
Sbjct: 199 PNISFSSSTSNLRQHQNHQDRI 220
>At1g03410.1 68414.m00321 2-oxoglutarate-dependent dioxygenase,
putative identical to 2A6 (GI:599622), a homolog of the
tomato ethylene synthesis regulatory protein E8;
contains Pfam profile PF03171: oxidoreductase,
2OG-Fe(II) oxygenase family
Length = 361
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -2
Query: 176 SKHTQFP--TILWQ-NITGLQMLLGHCYL 99
SKHT F TIL Q NI GLQ++ C++
Sbjct: 232 SKHTDFSFITILLQDNIGGLQVIHDQCWV 260
>At3g57810.2 68416.m06445 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 317
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 170 VCYEILSLCRENCISVEREELAV*FGVHQLGS 265
+CY ++ C N IS++R + +GV GS
Sbjct: 3 ICYSPITTCSRNAISIKRHLGSRLYGVVAHGS 34
>At3g57810.1 68416.m06444 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 317
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 170 VCYEILSLCRENCISVEREELAV*FGVHQLGS 265
+CY ++ C N IS++R + +GV GS
Sbjct: 3 ICYSPITTCSRNAISIKRHLGSRLYGVVAHGS 34
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 143 QNITGLQMLLGHCYLFSVYKINCT 72
++IT L +GH FSV++ N T
Sbjct: 165 KDITSLNSKMGHFNFFSVHRFNIT 188
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 143 QNITGLQMLLGHCYLFSVYKINCT 72
++IT L +GH FSV++ N T
Sbjct: 165 KDITSLNSKMGHFNFFSVHRFNIT 188
>At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 404
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 143 QNITGLQMLLGHCYLFSVYKINCT 72
++IT L +GH FSV++ N T
Sbjct: 165 KDITSLNSKMGHFNFFSVHRFNIT 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,895,398
Number of Sequences: 28952
Number of extensions: 131477
Number of successful extensions: 341
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 271185840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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