Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H06
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.4  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    24   4.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.5  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 409 CSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGAT 516
           C C G            TRP  +CFVS+  +L   T
Sbjct: 74  CYCEGHCPGNLQNGTCETRPGGSCFVSVEAVLDEET 109


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 228 EIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAK 347
           E+F+++ Q  +E+ I   D I L  QAR     Y P E++
Sbjct: 255 EMFRQSVQEREEHGIVRPDLIHLLIQARKGQLRYQPQESE 294


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 569  QFAETAFVHQLSDTLQLGVAPCNIGLSD 486
            +F +  + H +++  Q GVA C +   D
Sbjct: 955  KFRKPFYKHSIAENSQYGVAVCTVVAED 982


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 411 AIPCVPWVILG 379
           A+ C+PW++LG
Sbjct: 649 ALLCIPWMLLG 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,815
Number of Sequences: 2352
Number of extensions: 11322
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)