Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_H05
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...    93   9e-19
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...    93   9e-19
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.                93   9e-19
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.        93   9e-19
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...    93   9e-19
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...    92   1e-18
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...    92   1e-18

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSH+RR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = +3

Query: 261 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDE 419
           MK+N  VTS R KNRKRHF+APSH+RR +MS+PLSKELRQK+NV+SMPIRKD+
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDD 53



 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 511 RKFVVYIERIQREKANGASVYVGIQPSKCVIVK 609
           +K+V+YIER+QREKANG +V+VGI PSK VI +
Sbjct: 76  KKYVIYIERVQREKANGTTVHVGIHPSKVVITR 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,714,660
Number of Sequences: 237096
Number of extensions: 1606449
Number of successful extensions: 2950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)